RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 RNF20Q5VTR2 975 aa22.32■■□□□ 1.16
PDE6B-202ENST00000429163 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
PDE6B-202ENST00000429163 RUFY3Q7L099 469 aa22.32■■□□□ 1.16
PDE6B-202ENST00000429163 COPS6Q7L5N1 327 aa22.32■■□□□ 1.16
PDE6B-202ENST00000429163 ZNF496Q96IT1 587 aaPredicted RBP22.32■■□□□ 1.16
PDE6B-202ENST00000429163 TMEM63CQ9P1W3 806 aa22.32■■□□□ 1.16
PDE6B-202ENST00000429163 RPAP1Q9BWH6 1393 aaPredicted RBP22.32■■□□□ 1.16
PDE6B-202ENST00000429163 CSPP1Q1MSJ5 1256 aa22.31■■□□□ 1.16
PDE6B-202ENST00000429163 PDLIM2Q96JY6 352 aa22.31■■□□□ 1.16
PDE6B-202ENST00000429163 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
PDE6B-202ENST00000429163 ZSCAN22P10073 491 aaPredicted RBP22.31■■□□□ 1.16
PDE6B-202ENST00000429163 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
PDE6B-202ENST00000429163 TSGA10IPQ3SY00 556 aa22.31■■□□□ 1.16
PDE6B-202ENST00000429163 HMG20BQ9P0W2 317 aa22.31■■□□□ 1.16
PDE6B-202ENST00000429163 SLC39A6Q13433 755 aa22.3■■□□□ 1.16
PDE6B-202ENST00000429163 ANKRD1Q15327 319 aa22.3■■□□□ 1.16
PDE6B-202ENST00000429163 PDRG1Q9NUG6 133 aa22.3■■□□□ 1.16
PDE6B-202ENST00000429163 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
PDE6B-202ENST00000429163 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
PDE6B-202ENST00000429163 MED23Q9ULK4 1368 aa22.29■■□□□ 1.16
PDE6B-202ENST00000429163 STX6O43752 255 aa22.29■■□□□ 1.16
PDE6B-202ENST00000429163 LETM1O95202 739 aaPredicted RBP22.29■■□□□ 1.16
PDE6B-202ENST00000429163 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
PDE6B-202ENST00000429163 PTH1RQ03431 593 aa22.29■■□□□ 1.16
PDE6B-202ENST00000429163 CYP27B1O15528 508 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 ATP5JP18859 108 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 PLBD2Q8NHP8 589 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 MYD88Q99836 296 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
PDE6B-202ENST00000429163 RBSNQ9H1K0 784 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 ARFGEF2Q9Y6D5 1785 aa22.28■■□□□ 1.16
PDE6B-202ENST00000429163 STRCP1A6NGW2 1772 aa22.27■■□□□ 1.16
PDE6B-202ENST00000429163 RFX5P48382 616 aaPredicted RBP22.27■■□□□ 1.16
PDE6B-202ENST00000429163 CREB3L3Q68CJ9 461 aa22.27■■□□□ 1.16
PDE6B-202ENST00000429163 PRPF40BQ6NWY9 871 aaKnown RBP22.27■■□□□ 1.16
PDE6B-202ENST00000429163 ZSCAN30Q86W11 494 aa22.27■■□□□ 1.16
PDE6B-202ENST00000429163 JAKMIP1Q96N16 626 aaKnown RBP22.27■■□□□ 1.16
PDE6B-202ENST00000429163 RBM8AQ9Y5S9 174 aaKnown RBP22.27■■□□□ 1.16
PDE6B-202ENST00000429163 GLI3P10071 1580 aa22.27■■□□□ 1.16
PDE6B-202ENST00000429163 MYL6BP14649 208 aa22.27■■□□□ 1.15
PDE6B-202ENST00000429163 FAM184AQ8NB25 1140 aa22.27■■□□□ 1.15
PDE6B-202ENST00000429163 SYT1P21579 422 aa22.26■■□□□ 1.15
PDE6B-202ENST00000429163 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
PDE6B-202ENST00000429163 CABP4P57796 275 aa22.25■■□□□ 1.15
PDE6B-202ENST00000429163 NMIQ13287 307 aaPredicted RBP22.25■■□□□ 1.15
PDE6B-202ENST00000429163 F13A1P00488 732 aa22.25■■□□□ 1.15
PDE6B-202ENST00000429163 KRT32Q14532 448 aa22.25■■□□□ 1.15
PDE6B-202ENST00000429163 FSD1Q9BTV5 496 aa22.25■■□□□ 1.15
PDE6B-202ENST00000429163 CCDC8Q9H0W5 538 aaPredicted RBP22.25■■□□□ 1.15
PDE6B-202ENST00000429163 RBM27Q9P2N5 1060 aaKnown RBP22.25■■□□□ 1.15
PDE6B-202ENST00000429163 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
PDE6B-202ENST00000429163 ERVV-2B6SEH9 535 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 UBE2HP62256 183 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 PTPN12Q05209 780 aaKnown RBP22.24■■□□□ 1.15
PDE6B-202ENST00000429163 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 USP48Q86UV5 1035 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 SYCE3A1L190 88 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 GPR108Q9NPR9 543 aa22.24■■□□□ 1.15
PDE6B-202ENST00000429163 PCDH11XQ9BZA7 1347 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 PCDH11YQ9BZA8 1340 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 SLC27A2O14975 620 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 PDCP20941 246 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 MCM5P33992 734 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 UVSSAQ2YD98 709 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 TNNI3KQ59H18 835 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 FPGT-TNNI3KV9GXZ4 949 aa22.23■■□□□ 1.15
PDE6B-202ENST00000429163 KCNJ4P48050 445 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 HSPA2P54652 639 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 CASP7P55210 303 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 EPHA10Q5JZY3 1008 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 FOXD4L5Q5VV16 416 aaPredicted RBP22.22■■□□□ 1.15
PDE6B-202ENST00000429163 FOXD4L4Q8WXT5 416 aaPredicted RBP22.22■■□□□ 1.15
PDE6B-202ENST00000429163 TSPY26PQ9H489 355 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 NSFL1CQ9UNZ2 370 aaKnown RBP22.22■■□□□ 1.15
PDE6B-202ENST00000429163 NKX1-1Q15270 411 aaPredicted RBP22.22■■□□□ 1.15
PDE6B-202ENST00000429163 ADCK5Q3MIX3 580 aa22.22■■□□□ 1.15
PDE6B-202ENST00000429163 CCDC183Q5T5S1 534 aa22.21■■□□□ 1.15
PDE6B-202ENST00000429163 FAM227BQ96M60 508 aa22.21■■□□□ 1.15
PDE6B-202ENST00000429163 BOLA2Q9H3K6 86 aa22.21■■□□□ 1.15
PDE6B-202ENST00000429163 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
PDE6B-202ENST00000429163 H7C1W4 665 aa22.2■■□□□ 1.14
PDE6B-202ENST00000429163 BLOC1S2Q6QNY1 142 aa22.2■■□□□ 1.14
PDE6B-202ENST00000429163 TLR7Q9NYK1 1049 aaKnown RBP22.2■■□□□ 1.14
PDE6B-202ENST00000429163 PAPPAQ13219 1627 aa22.2■■□□□ 1.14
PDE6B-202ENST00000429163 GJB2P29033 226 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 SIL1Q9H173 461 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 ATG3Q9NT62 314 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
PDE6B-202ENST00000429163 A0A087WZG4 1122 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 A0A0D9SFI3 127 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 HAUS7Q99871 368 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 MTMR6Q9Y217 621 aa22.19■■□□□ 1.14
PDE6B-202ENST00000429163 RPS6KB1P23443 525 aa22.18■■□□□ 1.14
PDE6B-202ENST00000429163 CCDC83Q8IWF9 413 aa22.18■■□□□ 1.14
PDE6B-202ENST00000429163 DBNLQ9UJU6 430 aaKnown RBP22.18■■□□□ 1.14
PDE6B-202ENST00000429163 NOL7Q9UMY1 257 aaKnown RBP22.18■■□□□ 1.14
PDE6B-202ENST00000429163 TAF5LO75529 589 aa22.18■■□□□ 1.14
PDE6B-202ENST00000429163 MSNP26038 577 aaKnown RBP22.18■■□□□ 1.14
PDE6B-202ENST00000429163 UBE3BQ7Z3V4 1068 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms