RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
APOBEC3C-202ENST00000428892 LMOD1P29536 600 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3C-202ENST00000428892 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
APOBEC3C-202ENST00000428892 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3C-202ENST00000428892 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
APOBEC3C-202ENST00000428892 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
APOBEC3C-202ENST00000428892 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.13
APOBEC3C-202ENST00000428892 PLCB2Q00722 1185 aa14.27□□□□□ -0.13
APOBEC3C-202ENST00000428892 DEFB115Q30KQ5 88 aa14.27□□□□□ -0.13
APOBEC3C-202ENST00000428892 MCM10Q7L590 875 aa14.27□□□□□ -0.13
APOBEC3C-202ENST00000428892 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
APOBEC3C-202ENST00000428892 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 LBX1P52954 281 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 MAP2K1Q02750 393 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 MAP1SQ66K74 1059 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 GPC2Q8N158 579 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 SYNE4Q8N205 404 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 BEGAINQ9BUH8 593 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 NYXQ9GZU5 481 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 ADAMTS8Q9UP79 889 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
APOBEC3C-202ENST00000428892 MAPK8IP3Q9UPT6 1336 aa14.25□□□□□ -0.13
APOBEC3C-202ENST00000428892 ITGBL1O95965 494 aaPredicted RBP14.25□□□□□ -0.13
APOBEC3C-202ENST00000428892 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
APOBEC3C-202ENST00000428892 WDR33Q9C0J8 1336 aaKnown RBP14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 RGL2O15211 777 aa14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 NEFMP07197 916 aa14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 GRM1Q13255 1194 aa14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 WDR43Q15061 677 aaKnown RBP eCLIP14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 TMX4Q9H1E5 349 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 WBP1LQ9NX94 342 aa14.24□□□□□ -0.13
APOBEC3C-202ENST00000428892 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 FZD9O00144 591 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 PSMD1Q99460 953 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 THSD7BQ9C0I4 1608 aa14.23□□□□□ -0.13
APOBEC3C-202ENST00000428892 LTBP1Q14766 1721 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 KLRG2A4D1S0 409 aaPredicted RBP14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 ANP32CO43423 234 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 ECE1P42892 770 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 CCDC146Q8IYE0 955 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
APOBEC3C-202ENST00000428892 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 HLFQ16534 295 aa14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 NBPF15Q8N660 670 aa14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
APOBEC3C-202ENST00000428892 ABCC12Q96J65 1359 aa14.21□□□□□ -0.14
APOBEC3C-202ENST00000428892 TCERG1O14776 1098 aaKnown RBP14.2□□□□□ -0.14
APOBEC3C-202ENST00000428892 RIPK4P57078 832 aa14.2□□□□□ -0.14
APOBEC3C-202ENST00000428892 GRIPAP1Q4V328 841 aa14.2□□□□□ -0.14
APOBEC3C-202ENST00000428892 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
APOBEC3C-202ENST00000428892 ABHD8Q96I13 439 aa14.2□□□□□ -0.14
APOBEC3C-202ENST00000428892 ANKRD36CQ5JPF3 1778 aa14.19□□□□□ -0.14
APOBEC3C-202ENST00000428892 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
APOBEC3C-202ENST00000428892 NIM1KQ8IY84 436 aa14.19□□□□□ -0.14
APOBEC3C-202ENST00000428892 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
APOBEC3C-202ENST00000428892 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
APOBEC3C-202ENST00000428892 MAP3K15Q6ZN16 1313 aa14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 MYL6BP14649 208 aa14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 GPTP24298 496 aa14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 USP50Q70EL3 339 aaPredicted RBP14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 CAPNS2Q96L46 248 aa14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
APOBEC3C-202ENST00000428892 COL4A5P29400 1685 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 LAMB2P55268 1798 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 CCDC85CA6NKD9 419 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 ERVV-1B6SEH8 477 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 PPIP5K2O43314 1243 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 FAM161AQ3B820 660 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 ZBTB3Q9H5J0 574 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 IBTKQ9P2D0 1353 aaPredicted RBP14.17□□□□□ -0.14
APOBEC3C-202ENST00000428892 SNED1Q8TER0 1413 aa14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 EPS15P42566 896 aa14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 SCNN1DP51172 638 aa14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 CYP4F22Q6NT55 531 aa14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 PPP1R42Q7Z4L9 355 aa14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 GPR101Q96P66 508 aaPredicted RBP14.16□□□□□ -0.14
APOBEC3C-202ENST00000428892 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms