RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SGIP1Q9BQI5 828 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 IGSF1Q8N6C5 1336 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 DZIP1Q86YF9 867 aaKnown RBP8.73□□□□□ -1.01
CNOT4-206ENST00000428680 SRCIN1Q9C0H9 1055 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 VPS33BQ9H267 617 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 METTL24Q5JXM2 366 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 BABAM1Q9NWV8 329 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 BCS1LQ9Y276 419 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 ATP10DQ9P241 1426 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 XBP1P17861 261 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 MCTP1Q6DN14 999 aa8.73□□□□□ -1.01
CNOT4-206ENST00000428680 PDE6BP35913 854 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 SLC4A2P04920 1241 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 TPTE2Q6XPS3 522 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 FSD1Q9BTV5 496 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 ZC3H12CQ9C0D7 883 aaKnown RBP8.72□□□□□ -1.01
CNOT4-206ENST00000428680 BRMS1Q9HCU9 246 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 GNPATO15228 680 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 ZBTB7AO95365 584 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 MMP14P50281 582 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 EIF6P56537 245 aaKnown RBP8.72□□□□□ -1.01
CNOT4-206ENST00000428680 TPD52L1Q16890 204 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-206ENST00000428680 ZNF526Q8TF50 670 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-206ENST00000428680 SCLT1Q96NL6 688 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 AXIN2Q9Y2T1 843 aa8.72□□□□□ -1.01
CNOT4-206ENST00000428680 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 CCER2I3L3R5 266 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 SIK1P57059 783 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 SIL1Q9H173 461 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 ZNF287Q9HBT7 754 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 DDX19BQ9UMR2 479 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 PHKG2P15735 406 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 TPM4P67936 248 aa8.71□□□□□ -1.01
CNOT4-206ENST00000428680 ATF5Q9Y2D1 282 aaPredicted RBP8.71□□□□□ -1.01
CNOT4-206ENST00000428680 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 POLR3DP05423 398 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-206ENST00000428680 USP5P45974 858 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 EAPPQ56P03 285 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-206ENST00000428680 SLKQ9H2G2 1235 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-206ENST00000428680 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 PIM2Q9P1W9 311 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 IBTKQ9P2D0 1353 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-206ENST00000428680 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-206ENST00000428680 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 TMC4Q7Z404 712 aa8.71□□□□□ -1.02
CNOT4-206ENST00000428680 ZSCAN25Q6NSZ9 544 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 ERC1Q8IUD2 1116 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 RGPD5Q99666 1765 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-206ENST00000428680 FKBP4Q02790 459 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNOT4-206ENST00000428680 IFIT5Q13325 482 aaKnown RBP8.7□□□□□ -1.02
CNOT4-206ENST00000428680 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
CNOT4-206ENST00000428680 FCHSD2O94868 740 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 SMC1BQ8NDV3 1235 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 NOC3LQ8WTT2 800 aaKnown RBP8.7□□□□□ -1.02
CNOT4-206ENST00000428680 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 MEGF6O75095 1541 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 MRC1P22897 1456 aa8.7□□□□□ -1.02
CNOT4-206ENST00000428680 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 CABP5Q9NP86 173 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 DNTTIP2Q5QJE6 756 aaKnown RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 NYXQ9GZU5 481 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 IQCA1LA6NCM1 817 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 ST18O60284 1047 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 LDHCP07864 332 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 STK11IPQ8N1F8 1099 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 IDH1O75874 414 aaKnown RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 SUPT20HQ8NEM7 779 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 EYA3Q99504 573 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 SOS1Q07889 1333 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-206ENST00000428680 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
CNOT4-206ENST00000428680 TPM2P07951 284 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 SPINK5Q9NQ38 1064 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-206ENST00000428680 KDRP35968 1356 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 HSPA6P17066 643 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 TDO2P48775 406 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 H0YIN7 160 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 TAF7Q15545 349 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-206ENST00000428680 ANKRD18BA2A2Z9 1011 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 TOMM70O94826 608 aa8.68□□□□□ -1.02
CNOT4-206ENST00000428680 NIP7Q9Y221 180 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNOT4-206ENST00000428680 C4AP0C0L4 1744 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 RFX1P22670 979 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 ZNF76P36508 570 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 MPHOSPH6Q99547 160 aaKnown RBP8.67□□□□□ -1.02
CNOT4-206ENST00000428680 COG6Q9Y2V7 657 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms