RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GYS1P13807 737 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 TRIM28Q13263 835 aaKnown RBP9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 ZNF34Q8IZ26 560 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 SETDB2Q96T68 719 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
HMGA1P4-201ENST00000428643 CARMIL3Q8ND23 1372 aa9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 IBTKQ9P2D0 1353 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 GNAI2P04899 355 aa9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 NBPF7P0C2Y1 421 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 R3HDM1Q15032 1099 aaKnown RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 NBPF5PQ86XG9 351 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 UTP14AQ9BVJ6 771 aaKnown RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 ZBTB40Q9NUA8 1239 aa9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 TRMT112Q9UI30 125 aaKnown RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 HDAC5Q9UQL6 1122 aa9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 LRRFIP2Q9Y608 721 aaKnown RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P4-201ENST00000428643 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 AAMPQ13685 434 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 NFIXQ14938 502 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 ERICH6BQ5W0A0 696 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 PPP1R42Q7Z4L9 355 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 ZBTB38Q8NAP3 1195 aaPredicted RBP9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 FAM89AQ96GI7 184 aa9.92□□□□□ -0.82
HMGA1P4-201ENST00000428643 TUBGCP6Q96RT7 1819 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 UTYO14607 1347 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 H7C1W4 665 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 NTSR2O95665 410 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 MMP10P09238 476 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 DDR1Q08345 913 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 SUCLG2Q96I99 432 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 PDGFDQ9GZP0 370 aaPredicted RBP9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 NYXQ9GZU5 481 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 ANKRD36CQ5JPF3 1778 aa9.91□□□□□ -0.82
HMGA1P4-201ENST00000428643 IRS4O14654 1257 aaPredicted RBP9.9□□□□□ -0.82
HMGA1P4-201ENST00000428643 HSP90B1P14625 803 aaKnown RBP9.9□□□□□ -0.82
HMGA1P4-201ENST00000428643 CASP7P55210 303 aa9.9□□□□□ -0.82
HMGA1P4-201ENST00000428643 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
HMGA1P4-201ENST00000428643 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 SERPINB2P05120 415 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 HCLS1P14317 486 aaPredicted RBP9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 ST5P78524 1137 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 CEP85Q6P2H3 762 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 TPTE2Q6XPS3 522 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 CCDC136Q96JN2 1154 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 BICC1Q9H694 974 aaKnown RBP9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 COL24A1Q17RW2 1714 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 QSER1Q2KHR3 1735 aa9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
HMGA1P4-201ENST00000428643 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 TM4SF1P30408 202 aa9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 CTSWP56202 376 aa9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 EPHA10Q5JZY3 1008 aa9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 CCDC24Q8N4L8 307 aa9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 PARP3Q9Y6F1 533 aa9.88□□□□□ -0.83
HMGA1P4-201ENST00000428643 SRGAP3O43295 1099 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 HMMRO75330 724 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 PRR5LQ6MZQ0 368 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 LMBR1LQ6UX01 489 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 ANKRD44Q8N8A2 993 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 KAZALD1Q96I82 304 aa9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
HMGA1P4-201ENST00000428643 NUP98P52948 1817 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 PDE8AO60658 829 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 POLD1P28340 1107 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 FOXO4P98177 505 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 RPAP2Q8IXW5 612 aaPredicted RBP9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 CASZ1Q86V15 1759 aa9.86□□□□□ -0.83
HMGA1P4-201ENST00000428643 PNMA6EA0A0J9YXQ4 647 aa9.85□□□□□ -0.83
HMGA1P4-201ENST00000428643 MTX1Q13505 466 aa9.85□□□□□ -0.83
HMGA1P4-201ENST00000428643 HDAC1Q13547 482 aaPredicted RBP9.85□□□□□ -0.83
HMGA1P4-201ENST00000428643 RABL6Q3YEC7 729 aaPredicted RBP9.85□□□□□ -0.83
HMGA1P4-201ENST00000428643 CCDC152Q4G0S7 254 aa9.85□□□□□ -0.83
HMGA1P4-201ENST00000428643 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
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