RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 MYD88Q99836 296 aa29.88■■■□□ 2.37
GLI3-202ENST00000428534 NTSR2O95665 410 aa29.87■■■□□ 2.37
GLI3-202ENST00000428534 MRPL50Q8N5N7 158 aaKnown RBP29.87■■■□□ 2.37
GLI3-202ENST00000428534 PIM2Q9P1W9 311 aa29.87■■■□□ 2.37
GLI3-202ENST00000428534 TRMT112Q9UI30 125 aaKnown RBP29.87■■■□□ 2.37
GLI3-202ENST00000428534 PXDNLA1KZ92 1463 aa29.87■■■□□ 2.37
GLI3-202ENST00000428534 ANKRD36CQ5JPF3 1778 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 A0A0G2JLW4 131 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 DPEP1P16444 411 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 DNAAF4Q8WXU2 420 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 SSH1Q8WYL5 1049 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 PTPRCP08575 1304 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 ADCY9O60503 1353 aa29.86■■■□□ 2.37
GLI3-202ENST00000428534 N4BP2Q86UW6 1770 aaPredicted RBP29.85■■■□□ 2.37
GLI3-202ENST00000428534 ATP5J2-PTCD1G3V325 749 aa29.85■■■□□ 2.37
GLI3-202ENST00000428534 C2CD5Q86YS7 1000 aa29.85■■■□□ 2.37
GLI3-202ENST00000428534 SMC4Q9NTJ3 1288 aa29.85■■■□□ 2.37
GLI3-202ENST00000428534 ARFGEF2Q9Y6D5 1785 aa29.85■■■□□ 2.37
GLI3-202ENST00000428534 BRPF1P55201 1214 aaPredicted RBP29.84■■■□□ 2.37
GLI3-202ENST00000428534 CWC25Q9NXE8 425 aaPredicted RBP29.84■■■□□ 2.37
GLI3-202ENST00000428534 SH3TC1Q8TE82 1336 aa29.84■■■□□ 2.37
GLI3-202ENST00000428534 RIC1Q4ADV7 1423 aa29.84■■■□□ 2.37
GLI3-202ENST00000428534 ERFEQ4G0M1 354 aa29.83■■■□□ 2.37
GLI3-202ENST00000428534 SLC10A5Q5PT55 438 aa29.83■■■□□ 2.37
GLI3-202ENST00000428534 KLRG2A4D1S0 409 aaPredicted RBP29.82■■■□□ 2.36
GLI3-202ENST00000428534 NUTM1Q86Y26 1132 aa29.82■■■□□ 2.36
GLI3-202ENST00000428534 RARSP54136 660 aaKnown RBP29.81■■■□□ 2.36
GLI3-202ENST00000428534 CCDC24Q8N4L8 307 aa29.81■■■□□ 2.36
GLI3-202ENST00000428534 NLRP3Q96P20 1036 aa29.81■■■□□ 2.36
GLI3-202ENST00000428534 KCNA3P22001 575 aa29.8■■■□□ 2.36
GLI3-202ENST00000428534 CHRNA5P30532 468 aa29.8■■■□□ 2.36
GLI3-202ENST00000428534 ZBTB38Q8NAP3 1195 aaPredicted RBP29.8■■■□□ 2.36
GLI3-202ENST00000428534 LINS1Q8NG48 757 aa29.8■■■□□ 2.36
GLI3-202ENST00000428534 MASTLQ96GX5 879 aa29.8■■■□□ 2.36
GLI3-202ENST00000428534 DALRD3Q5D0E6 543 aaKnown RBP29.79■■■□□ 2.36
GLI3-202ENST00000428534 STYK1Q6J9G0 422 aa29.79■■■□□ 2.36
GLI3-202ENST00000428534 CNKSR1Q969H4 720 aa29.79■■■□□ 2.36
GLI3-202ENST00000428534 SRGNP10124 158 aa29.78■■■□□ 2.36
GLI3-202ENST00000428534 NPR1P16066 1061 aa29.78■■■□□ 2.36
GLI3-202ENST00000428534 TTLL6Q8N841 843 aa29.78■■■□□ 2.36
GLI3-202ENST00000428534 KIF16BQ96L93 1317 aa29.77■■■□□ 2.36
GLI3-202ENST00000428534 PCCAP05165 728 aaPredicted RBP29.77■■■□□ 2.36
GLI3-202ENST00000428534 ZNF622Q969S3 477 aaKnown RBP eCLIP29.77■■■□□ 2.36
GLI3-202ENST00000428534 NEURL1BA8MQ27 555 aa29.76■■■□□ 2.35
GLI3-202ENST00000428534 IGKV5-2P06315 115 aa29.76■■■□□ 2.35
GLI3-202ENST00000428534 ALDH1B1P30837 517 aa29.76■■■□□ 2.35
GLI3-202ENST00000428534 ZNF526Q8TF50 670 aaPredicted RBP29.76■■■□□ 2.35
GLI3-202ENST00000428534 BCL2L13Q9BXK5 485 aa29.76■■■□□ 2.35
GLI3-202ENST00000428534 BCS1LQ9Y276 419 aa29.76■■■□□ 2.35
GLI3-202ENST00000428534 BRCA1P38398 1863 aaKnown RBP29.76■■■□□ 2.35
GLI3-202ENST00000428534 IPO8O15397 1037 aaKnown RBP29.75■■■□□ 2.35
GLI3-202ENST00000428534 GPBP1L1Q9HC44 474 aaPredicted RBP29.75■■■□□ 2.35
GLI3-202ENST00000428534 CRY2Q49AN0 593 aa29.74■■■□□ 2.35
GLI3-202ENST00000428534 ARHGAP45Q92619 1136 aa29.74■■■□□ 2.35
GLI3-202ENST00000428534 RPGRQ92834 1020 aaKnown RBP29.74■■■□□ 2.35
GLI3-202ENST00000428534 FAM89AQ96GI7 184 aa29.74■■■□□ 2.35
GLI3-202ENST00000428534 API5Q9BZZ5 524 aaKnown RBP29.74■■■□□ 2.35
GLI3-202ENST00000428534 ABCC12Q96J65 1359 aa29.74■■■□□ 2.35
GLI3-202ENST00000428534 F6X3S4 739 aa29.73■■■□□ 2.35
GLI3-202ENST00000428534 ALDH1L1O75891 902 aa29.73■■■□□ 2.35
GLI3-202ENST00000428534 RBM17Q96I25 401 aaKnown RBP29.73■■■□□ 2.35
GLI3-202ENST00000428534 ANKRD31Q8N7Z5 1873 aa29.73■■■□□ 2.35
GLI3-202ENST00000428534 CWF19L2Q2TBE0 894 aaKnown RBP29.72■■■□□ 2.35
GLI3-202ENST00000428534 BEND3Q5T5X7 828 aa29.72■■■□□ 2.35
GLI3-202ENST00000428534 SRCIN1Q9C0H9 1055 aa29.72■■■□□ 2.35
GLI3-202ENST00000428534 CDHR2Q9BYE9 1310 aa29.71■■■□□ 2.35
GLI3-202ENST00000428534 IRS4O14654 1257 aaPredicted RBP29.71■■■□□ 2.35
GLI3-202ENST00000428534 GCKRQ14397 625 aa29.71■■■□□ 2.35
GLI3-202ENST00000428534 SLC4A10Q6U841 1118 aa29.71■■■□□ 2.35
GLI3-202ENST00000428534 NOB1Q9ULX3 412 aaKnown RBP29.71■■■□□ 2.35
GLI3-202ENST00000428534 HCLS1P14317 486 aaPredicted RBP29.7■■■□□ 2.35
GLI3-202ENST00000428534 HOXA10P31260 410 aaPredicted RBP29.7■■■□□ 2.35
GLI3-202ENST00000428534 DLEC1Q9Y238 1755 aa29.69■■■□□ 2.34
GLI3-202ENST00000428534 SOGA3Q5TF21 947 aa29.68■■■□□ 2.34
GLI3-202ENST00000428534 CRAMP1Q96RY5 1269 aa29.68■■■□□ 2.34
GLI3-202ENST00000428534 H7C1W4 665 aa29.67■■■□□ 2.34
GLI3-202ENST00000428534 PDE8AO60658 829 aa29.67■■■□□ 2.34
GLI3-202ENST00000428534 SF3B3Q15393 1217 aaKnown RBP29.67■■■□□ 2.34
GLI3-202ENST00000428534 RTL5Q5HYW3 569 aaPredicted RBP29.66■■■□□ 2.34
GLI3-202ENST00000428534 DDX46Q7L014 1031 aaKnown RBP29.66■■■□□ 2.34
GLI3-202ENST00000428534 SYNE4Q8N205 404 aa29.66■■■□□ 2.34
GLI3-202ENST00000428534 CCT4P50991 539 aaKnown RBP29.65■■■□□ 2.34
GLI3-202ENST00000428534 YTHDC1Q96MU7 727 aaKnown RBP29.65■■■□□ 2.34
GLI3-202ENST00000428534 C9orf78Q9NZ63 289 aaPredicted RBP29.65■■■□□ 2.34
GLI3-202ENST00000428534 ARFGEF1Q9Y6D6 1849 aa29.64■■■□□ 2.34
GLI3-202ENST00000428534 PRPF40BQ6NWY9 871 aaKnown RBP29.64■■■□□ 2.34
GLI3-202ENST00000428534 TMX4Q9H1E5 349 aaPredicted RBP29.64■■■□□ 2.34
GLI3-202ENST00000428534 CCDC152Q4G0S7 254 aa29.63■■■□□ 2.33
GLI3-202ENST00000428534 UBE3BQ7Z3V4 1068 aa29.63■■■□□ 2.33
GLI3-202ENST00000428534 BCAR3O75815 825 aa29.62■■■□□ 2.33
GLI3-202ENST00000428534 GRIPAP1Q4V328 841 aa29.62■■■□□ 2.33
GLI3-202ENST00000428534 PLA2G12BQ9BX93 195 aa29.62■■■□□ 2.33
GLI3-202ENST00000428534 TNRC6CQ9HCJ0 1690 aaKnown RBP29.62■■■□□ 2.33
GLI3-202ENST00000428534 COL11A2P13942 1736 aaPredicted RBP29.62■■■□□ 2.33
GLI3-202ENST00000428534 GRM8O00222 908 aa29.61■■■□□ 2.33
GLI3-202ENST00000428534 BBOX1O75936 387 aa29.61■■■□□ 2.33
GLI3-202ENST00000428534 ZKSCAN2Q63HK3 967 aa29.61■■■□□ 2.33
GLI3-202ENST00000428534 CC2D2BQ6DHV5 1058 aa29.61■■■□□ 2.33
GLI3-202ENST00000428534 ATF7IPQ6VMQ6 1270 aa29.61■■■□□ 2.33
GLI3-202ENST00000428534 TMC4Q7Z404 712 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms