RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
TRIM39-207ENST00000428404 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
TRIM39-207ENST00000428404 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
TRIM39-207ENST00000428404 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
TRIM39-207ENST00000428404 STK32BQ9NY57 414 aa15.69■□□□□ 0.1
TRIM39-207ENST00000428404 HDAC5Q9UQL6 1122 aa15.69■□□□□ 0.1
TRIM39-207ENST00000428404 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
TRIM39-207ENST00000428404 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 SCN7AQ01118 1682 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 PCCAP05165 728 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-207ENST00000428404 GYS1P13807 737 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 HDAC1Q13547 482 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-207ENST00000428404 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 ILDR2Q71H61 639 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-207ENST00000428404 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 ZBTB38Q8NAP3 1195 aaPredicted RBP15.68■□□□□ 0.1
TRIM39-207ENST00000428404 CCDC136Q96JN2 1154 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRIM39-207ENST00000428404 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
TRIM39-207ENST00000428404 IGHDP01880 384 aa15.67■□□□□ 0.1
TRIM39-207ENST00000428404 SUSD4Q5VX71 490 aa15.67■□□□□ 0.1
TRIM39-207ENST00000428404 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
TRIM39-207ENST00000428404 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
TRIM39-207ENST00000428404 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
TRIM39-207ENST00000428404 ATP8B2P98198 1209 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 MTX1Q13505 466 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-207ENST00000428404 UTP14AQ9BVJ6 771 aaKnown RBP15.66■□□□□ 0.1
TRIM39-207ENST00000428404 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 ANKRD36CQ5JPF3 1778 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 KDM2BQ8NHM5 1336 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 CDHR2Q9BYE9 1310 aa15.66■□□□□ 0.1
TRIM39-207ENST00000428404 NTSR2O95665 410 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 TM4SF1P30408 202 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 FOXO4P98177 505 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 NFIXQ14938 502 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 RABL6Q3YEC7 729 aaPredicted RBP15.65■□□□□ 0.1
TRIM39-207ENST00000428404 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 FAM89AQ96GI7 184 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 SETDB2Q96T68 719 aa15.65■□□□□ 0.1
TRIM39-207ENST00000428404 RWDD1Q9H446 243 aaPredicted RBP15.65■□□□□ 0.1
TRIM39-207ENST00000428404 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
TRIM39-207ENST00000428404 AFDNP55196 1824 aaKnown RBP15.65■□□□□ 0.1
TRIM39-207ENST00000428404 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
TRIM39-207ENST00000428404 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
TRIM39-207ENST00000428404 SYNE4Q8N205 404 aa15.64■□□□□ 0.09
TRIM39-207ENST00000428404 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
TRIM39-207ENST00000428404 POLA2Q14181 598 aa15.63■□□□□ 0.09
TRIM39-207ENST00000428404 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
TRIM39-207ENST00000428404 NLGN1Q8N2Q7 840 aa15.63■□□□□ 0.09
TRIM39-207ENST00000428404 SSH3Q8TE77 659 aa15.63■□□□□ 0.09
TRIM39-207ENST00000428404 SH3TC1Q8TE82 1336 aa15.63■□□□□ 0.09
TRIM39-207ENST00000428404 PNMA6EA0A0J9YXQ4 647 aa15.62■□□□□ 0.09
TRIM39-207ENST00000428404 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
TRIM39-207ENST00000428404 SLC10A5Q5PT55 438 aa15.62■□□□□ 0.09
TRIM39-207ENST00000428404 QSER1Q2KHR3 1735 aa15.62■□□□□ 0.09
TRIM39-207ENST00000428404 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-207ENST00000428404 HMMRO75330 724 aa15.61■□□□□ 0.09
TRIM39-207ENST00000428404 CSF1RP07333 972 aa15.61■□□□□ 0.09
TRIM39-207ENST00000428404 CENPQQ7L2Z9 268 aaPredicted RBP15.61■□□□□ 0.09
TRIM39-207ENST00000428404 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
TRIM39-207ENST00000428404 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
TRIM39-207ENST00000428404 MSH5O43196 834 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 DDR1Q08345 913 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 NBPF5PQ86XG9 351 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-207ENST00000428404 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 DCTPP1Q9H773 170 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 COL24A1Q17RW2 1714 aa15.6■□□□□ 0.09
TRIM39-207ENST00000428404 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
TRIM39-207ENST00000428404 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 PDE8AO60658 829 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 HSP90B1P14625 803 aaKnown RBP15.59■□□□□ 0.09
TRIM39-207ENST00000428404 ERFEQ4G0M1 354 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 LMBR1LQ6UX01 489 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
TRIM39-207ENST00000428404 HCLS1P14317 486 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-207ENST00000428404 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-207ENST00000428404 TTLL11Q8NHH1 800 aa15.58■□□□□ 0.08
TRIM39-207ENST00000428404 SLC16A10Q8TF71 515 aa15.58■□□□□ 0.08
TRIM39-207ENST00000428404 PDGFDQ9GZP0 370 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-207ENST00000428404 SERPINB2P05120 415 aa15.57■□□□□ 0.08
TRIM39-207ENST00000428404 CTSWP56202 376 aa15.57■□□□□ 0.08
TRIM39-207ENST00000428404 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
TRIM39-207ENST00000428404 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
TRIM39-207ENST00000428404 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
TRIM39-207ENST00000428404 PRR5LQ6MZQ0 368 aa15.56■□□□□ 0.08
TRIM39-207ENST00000428404 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
TRIM39-207ENST00000428404 ABCC12Q96J65 1359 aa15.56■□□□□ 0.08
TRIM39-207ENST00000428404 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
TRIM39-207ENST00000428404 MMP10P09238 476 aa15.55■□□□□ 0.08
TRIM39-207ENST00000428404 GTF2E1P29083 439 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-207ENST00000428404 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
TRIM39-207ENST00000428404 RTL9Q8NET4 1388 aa15.54■□□□□ 0.08
TRIM39-207ENST00000428404 PTPN12Q05209 780 aaKnown RBP15.54■□□□□ 0.08
TRIM39-207ENST00000428404 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
TRIM39-207ENST00000428404 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms