RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 AACSQ86V21 672 aa9.42□□□□□ -0.9
LRCH3-204ENST00000428136 RNF214Q8ND24 703 aa9.42□□□□□ -0.9
LRCH3-204ENST00000428136 BICC1Q9H694 974 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 ALS2Q96Q42 1657 aa9.42□□□□□ -0.9
LRCH3-204ENST00000428136 RFX7Q2KHR2 1363 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 IGKV5-2P06315 115 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 CPA1P15085 419 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 ZKSCAN1P17029 563 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 RBM8AQ9Y5S9 174 aaKnown RBP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 ELP1O95163 1332 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 PRAMEF22A3QJZ6 481 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 SLC27A2O14975 620 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 PSMA5P28066 241 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 XPCQ01831 940 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 G3BP1Q13283 466 aaKnown RBP eCLIP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 NMIQ13287 307 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
LRCH3-204ENST00000428136 CCDC83Q8IWF9 413 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 PDCL3Q9H2J4 239 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 TPCN1Q9ULQ1 816 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
LRCH3-204ENST00000428136 ANKRD1Q15327 319 aa9.4□□□□□ -0.9
LRCH3-204ENST00000428136 RGPD5Q99666 1765 aa9.4□□□□□ -0.9
LRCH3-204ENST00000428136 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
LRCH3-204ENST00000428136 NEURL1BA8MQ27 555 aa9.4□□□□□ -0.91
LRCH3-204ENST00000428136 FAM227BQ96M60 508 aa9.4□□□□□ -0.91
LRCH3-204ENST00000428136 COPRSQ9NQ92 184 aa9.4□□□□□ -0.91
LRCH3-204ENST00000428136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.91
LRCH3-204ENST00000428136 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.91
LRCH3-204ENST00000428136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.4□□□□□ -0.91
LRCH3-204ENST00000428136 TMEM94Q12767 1356 aa9.4□□□□□ -0.91
LRCH3-204ENST00000428136 COL18A1P39060 1754 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 KDM4AO75164 1064 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 RPS6KB1P23443 525 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 RFX5P48382 616 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 GCKRQ14397 625 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 ZNF790Q6PG37 636 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 ERBB3P21860 1342 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 PDCP20941 246 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 KIAA2012Q0VF49 1180 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 RABL6Q3YEC7 729 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
LRCH3-204ENST00000428136 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
LRCH3-204ENST00000428136 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 ATP5JP18859 108 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-204ENST00000428136 SASS6Q6UVJ0 657 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 PIBF1Q8WXW3 757 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 GLI3P10071 1580 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 ADAMTSL3P82987 1691 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 TAF5LO75529 589 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 ADCY5O95622 1261 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 SPTLC3Q9NUV7 552 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
LRCH3-204ENST00000428136 NPHP3Q7Z494 1330 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 DYNC1I1O14576 645 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 FIBPO43427 364 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-204ENST00000428136 RBM43Q6ZSC3 357 aaKnown RBP9.37□□□□□ -0.91
LRCH3-204ENST00000428136 CCDC8Q9H0W5 538 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-204ENST00000428136 C1orf167Q5SNV9 1468 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 EPHA10Q5JZY3 1008 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 MAP7D2Q96T17 732 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 PHKG2P15735 406 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 COL9A3Q14050 684 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-204ENST00000428136 KRT32Q14532 448 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
LRCH3-204ENST00000428136 BLOC1S2Q6QNY1 142 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 ARFGEF2Q9Y6D5 1785 aa9.37□□□□□ -0.91
LRCH3-204ENST00000428136 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 PARP4Q9UKK3 1724 aaKnown RBP9.36□□□□□ -0.91
LRCH3-204ENST00000428136 KRT85P78386 507 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 NEXNQ0ZGT2 675 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 GLIPR1L2Q4G1C9 344 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 KRT28Q7Z3Y7 464 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 NECAB1Q8N987 351 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
LRCH3-204ENST00000428136 PTPN12Q05209 780 aaKnown RBP9.36□□□□□ -0.91
LRCH3-204ENST00000428136 ZNF589Q86UQ0 364 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-204ENST00000428136 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 FSD1Q9BTV5 496 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 BOLA2Q9H3K6 86 aa9.36□□□□□ -0.91
LRCH3-204ENST00000428136 UQCRHLA0A096LP55 91 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 AP5Z1O43299 807 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms