RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
LSG1-202ENST00000427461 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
LSG1-202ENST00000427461 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
LSG1-202ENST00000427461 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
LSG1-202ENST00000427461 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
LSG1-202ENST00000427461 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
LSG1-202ENST00000427461 PGAP2Q9UHJ9 254 aa12.64□□□□□ -0.39
LSG1-202ENST00000427461 PIP4K2AP48426 406 aaPredicted RBP12.63□□□□□ -0.39
LSG1-202ENST00000427461 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
LSG1-202ENST00000427461 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
LSG1-202ENST00000427461 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
LSG1-202ENST00000427461 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
LSG1-202ENST00000427461 DZIP3Q86Y13 1208 aaKnown RBP12.62□□□□□ -0.39
LSG1-202ENST00000427461 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
LSG1-202ENST00000427461 SZT2Q5T011 3432 aa12.62□□□□□ -0.39
LSG1-202ENST00000427461 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
LSG1-202ENST00000427461 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
LSG1-202ENST00000427461 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
LSG1-202ENST00000427461 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
LSG1-202ENST00000427461 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
LSG1-202ENST00000427461 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
LSG1-202ENST00000427461 TCERG1O14776 1098 aaKnown RBP12.6□□□□□ -0.39
LSG1-202ENST00000427461 ZNF157P51786 506 aaPredicted RBP12.6□□□□□ -0.39
LSG1-202ENST00000427461 CXCL9Q07325 125 aa12.6□□□□□ -0.39
LSG1-202ENST00000427461 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
LSG1-202ENST00000427461 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
LSG1-202ENST00000427461 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
LSG1-202ENST00000427461 AOC3Q16853 763 aa12.59□□□□□ -0.39
LSG1-202ENST00000427461 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
LSG1-202ENST00000427461 POLR2AP24928 1970 aaKnown RBP12.58□□□□□ -0.4
LSG1-202ENST00000427461 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
LSG1-202ENST00000427461 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.4
LSG1-202ENST00000427461 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
LSG1-202ENST00000427461 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
LSG1-202ENST00000427461 ZNF296Q8WUU4 475 aaPredicted RBP12.58□□□□□ -0.4
LSG1-202ENST00000427461 GBA2Q9HCG7 927 aaPredicted RBP12.58□□□□□ -0.4
LSG1-202ENST00000427461 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
LSG1-202ENST00000427461 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
LSG1-202ENST00000427461 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
LSG1-202ENST00000427461 ZBTB22O15209 634 aa12.57□□□□□ -0.4
LSG1-202ENST00000427461 SLC10A3P09131 477 aa12.57□□□□□ -0.4
LSG1-202ENST00000427461 IL13P35225 146 aa12.57□□□□□ -0.4
LSG1-202ENST00000427461 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
LSG1-202ENST00000427461 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
LSG1-202ENST00000427461 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
LSG1-202ENST00000427461 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
LSG1-202ENST00000427461 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 HMOX1P09601 288 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
LSG1-202ENST00000427461 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 KCNQ3O43525 872 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 RAD17O75943 681 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
LSG1-202ENST00000427461 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
LSG1-202ENST00000427461 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
LSG1-202ENST00000427461 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
LSG1-202ENST00000427461 CENPFP49454 3210 aa12.54□□□□□ -0.4
LSG1-202ENST00000427461 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
LSG1-202ENST00000427461 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
LSG1-202ENST00000427461 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
LSG1-202ENST00000427461 HTTP42858 3142 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 BRCA2P51587 3418 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 A0A0C4DFX4 3053 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
LSG1-202ENST00000427461 EGFRP00533 1210 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 HLFQ16534 295 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
LSG1-202ENST00000427461 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
LSG1-202ENST00000427461 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
LSG1-202ENST00000427461 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
LSG1-202ENST00000427461 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
LSG1-202ENST00000427461 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
LSG1-202ENST00000427461 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
LSG1-202ENST00000427461 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
LSG1-202ENST00000427461 H7C1D1 291 aa12.51□□□□□ -0.41
LSG1-202ENST00000427461 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
LSG1-202ENST00000427461 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
LSG1-202ENST00000427461 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
LSG1-202ENST00000427461 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
LSG1-202ENST00000427461 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
LSG1-202ENST00000427461 COL6A3P12111 3177 aa12.51□□□□□ -0.41
LSG1-202ENST00000427461 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
LSG1-202ENST00000427461 GPR25O00155 361 aa12.5□□□□□ -0.41
LSG1-202ENST00000427461 TEFQ10587 303 aa12.5□□□□□ -0.41
LSG1-202ENST00000427461 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
LSG1-202ENST00000427461 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
LSG1-202ENST00000427461 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
LSG1-202ENST00000427461 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
LSG1-202ENST00000427461 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
LSG1-202ENST00000427461 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
LSG1-202ENST00000427461 R3HDMLQ9H3Y0 253 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms