RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 HOXA10P31260 410 aaPredicted RBP20.85■□□□□ 0.93
HLA-DQB2-230ENST00000427449 CCDC27Q2M243 656 aa20.85■□□□□ 0.93
HLA-DQB2-230ENST00000427449 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
HLA-DQB2-230ENST00000427449 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
HLA-DQB2-230ENST00000427449 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
HLA-DQB2-230ENST00000427449 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
HLA-DQB2-230ENST00000427449 SYNE4Q8N205 404 aa20.84■□□□□ 0.93
HLA-DQB2-230ENST00000427449 C8orf58Q8NAV2 365 aa20.84■□□□□ 0.93
HLA-DQB2-230ENST00000427449 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
HLA-DQB2-230ENST00000427449 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
HLA-DQB2-230ENST00000427449 PARP10Q53GL7 1025 aa20.82■□□□□ 0.92
HLA-DQB2-230ENST00000427449 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
HLA-DQB2-230ENST00000427449 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
HLA-DQB2-230ENST00000427449 GNAI1P63096 354 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 WWC1Q8IX03 1113 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 ISCA1Q9BUE6 129 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 TAOK3Q9H2K8 898 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 ZNF646O15015 1829 aaPredicted RBP20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
HLA-DQB2-230ENST00000427449 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
HLA-DQB2-230ENST00000427449 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
HLA-DQB2-230ENST00000427449 AIMP1Q12904 312 aaKnown RBP20.8■□□□□ 0.92
HLA-DQB2-230ENST00000427449 DBF4Q9UBU7 674 aaPredicted RBP20.8■□□□□ 0.92
HLA-DQB2-230ENST00000427449 NPHP1O15259 732 aa20.79■□□□□ 0.92
HLA-DQB2-230ENST00000427449 CCDC93Q567U6 631 aa20.79■□□□□ 0.92
HLA-DQB2-230ENST00000427449 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
HLA-DQB2-230ENST00000427449 TSR2Q969E8 191 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB2-230ENST00000427449 MRS2Q9HD23 443 aa20.79■□□□□ 0.92
HLA-DQB2-230ENST00000427449 A0A1B0GUL6 1792 aa20.78■□□□□ 0.92
HLA-DQB2-230ENST00000427449 TOMM70O94826 608 aa20.78■□□□□ 0.92
HLA-DQB2-230ENST00000427449 PHAXQ9H814 394 aaKnown RBP20.78■□□□□ 0.92
HLA-DQB2-230ENST00000427449 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
HLA-DQB2-230ENST00000427449 HSPA6P17066 643 aa20.77■□□□□ 0.92
HLA-DQB2-230ENST00000427449 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.92
HLA-DQB2-230ENST00000427449 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
HLA-DQB2-230ENST00000427449 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
HLA-DQB2-230ENST00000427449 ABCC4O15439 1325 aa20.77■□□□□ 0.91
HLA-DQB2-230ENST00000427449 SOGA3Q5TF21 947 aa20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 PSME4Q14997 1843 aa20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 IL16Q14005 1332 aa20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
HLA-DQB2-230ENST00000427449 RBM46Q8TBY0 533 aaKnown RBP20.75■□□□□ 0.91
HLA-DQB2-230ENST00000427449 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ANP32CO43423 234 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ALDH1B1P30837 517 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 HSP90AB3PQ58FF7 597 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ANKRD13DQ6ZTN6 518 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ZNF428Q96B54 188 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 PSMD1Q99460 953 aa20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
HLA-DQB2-230ENST00000427449 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
HLA-DQB2-230ENST00000427449 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ZNF521Q96K83 1311 aa20.73■□□□□ 0.91
HLA-DQB2-230ENST00000427449 FANCIQ9NVI1 1328 aa20.73■□□□□ 0.91
HLA-DQB2-230ENST00000427449 SCN9AQ15858 1988 aa20.72■□□□□ 0.91
HLA-DQB2-230ENST00000427449 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
HLA-DQB2-230ENST00000427449 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
HLA-DQB2-230ENST00000427449 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
HLA-DQB2-230ENST00000427449 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
HLA-DQB2-230ENST00000427449 PCNTO95613 3336 aa20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 FZD9O00144 591 aa20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 RPGRQ92834 1020 aaKnown RBP20.7■□□□□ 0.9
HLA-DQB2-230ENST00000427449 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB2-230ENST00000427449 TRMT112Q9UI30 125 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB2-230ENST00000427449 POTEIP0CG38 1075 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 POTEJP0CG39 1038 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 G2E3Q7L622 706 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 DNAJC5GQ8N7S2 189 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 NLRP3Q96P20 1036 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
HLA-DQB2-230ENST00000427449 VEGFAP15692 232 aaPredicted RBP20.67■□□□□ 0.9
HLA-DQB2-230ENST00000427449 FSTL1Q12841 308 aa20.67■□□□□ 0.9
HLA-DQB2-230ENST00000427449 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
HLA-DQB2-230ENST00000427449 RTFDC1Q9BY42 306 aaPredicted RBP20.67■□□□□ 0.9
HLA-DQB2-230ENST00000427449 IGKV5-2P06315 115 aa20.66■□□□□ 0.9
HLA-DQB2-230ENST00000427449 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
HLA-DQB2-230ENST00000427449 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
HLA-DQB2-230ENST00000427449 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
HLA-DQB2-230ENST00000427449 WDR63Q8IWG1 891 aa20.65■□□□□ 0.9
HLA-DQB2-230ENST00000427449 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
HLA-DQB2-230ENST00000427449 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
HLA-DQB2-230ENST00000427449 GRAPQ13588 217 aa20.64■□□□□ 0.89
HLA-DQB2-230ENST00000427449 GRAPLQ8TC17 118 aaPredicted RBP20.64■□□□□ 0.89
HLA-DQB2-230ENST00000427449 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.89
HLA-DQB2-230ENST00000427449 HTRA3P83110 453 aa20.63■□□□□ 0.89
HLA-DQB2-230ENST00000427449 MYD88Q99836 296 aa20.63■□□□□ 0.89
HLA-DQB2-230ENST00000427449 VAMP4O75379 141 aa20.62■□□□□ 0.89
HLA-DQB2-230ENST00000427449 GOLGA2Q08379 1002 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms