RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 RREB1Q92766 1687 aa17.73■□□□□ 0.43
CDK3-201ENST00000425876 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
CDK3-201ENST00000425876 KCNQ2O43526 872 aa17.73■□□□□ 0.43
CDK3-201ENST00000425876 SDSP20132 328 aa17.73■□□□□ 0.43
CDK3-201ENST00000425876 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
CDK3-201ENST00000425876 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
CDK3-201ENST00000425876 KRT27Q7Z3Y8 459 aa17.73■□□□□ 0.43
CDK3-201ENST00000425876 IL1RAPL2Q9NP60 686 aa17.73■□□□□ 0.43
CDK3-201ENST00000425876 RFX5P48382 616 aaPredicted RBP17.72■□□□□ 0.43
CDK3-201ENST00000425876 INTS5Q6P9B9 1019 aaKnown RBP17.72■□□□□ 0.43
CDK3-201ENST00000425876 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
CDK3-201ENST00000425876 PA2G4Q9UQ80 394 aaKnown RBP17.72■□□□□ 0.43
CDK3-201ENST00000425876 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
CDK3-201ENST00000425876 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
CDK3-201ENST00000425876 FOXO4P98177 505 aa17.71■□□□□ 0.43
CDK3-201ENST00000425876 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
CDK3-201ENST00000425876 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
CDK3-201ENST00000425876 CRKLP46109 303 aaKnown RBP17.7■□□□□ 0.42
CDK3-201ENST00000425876 ITPK1Q13572 414 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
CDK3-201ENST00000425876 CASC1Q6TDU7 716 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
CDK3-201ENST00000425876 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
CDK3-201ENST00000425876 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
CDK3-201ENST00000425876 SASH1O94885 1247 aa17.69■□□□□ 0.42
CDK3-201ENST00000425876 LMBR1LQ6UX01 489 aa17.69■□□□□ 0.42
CDK3-201ENST00000425876 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
CDK3-201ENST00000425876 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
CDK3-201ENST00000425876 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
CDK3-201ENST00000425876 HLFQ16534 295 aa17.68■□□□□ 0.42
CDK3-201ENST00000425876 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
CDK3-201ENST00000425876 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
CDK3-201ENST00000425876 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
CDK3-201ENST00000425876 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
CDK3-201ENST00000425876 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
CDK3-201ENST00000425876 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
CDK3-201ENST00000425876 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
CDK3-201ENST00000425876 ARXQ96QS3 562 aa17.66■□□□□ 0.42
CDK3-201ENST00000425876 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
CDK3-201ENST00000425876 ERC2O15083 957 aa17.66■□□□□ 0.42
CDK3-201ENST00000425876 RGL2O15211 777 aa17.66■□□□□ 0.42
CDK3-201ENST00000425876 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
CDK3-201ENST00000425876 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
CDK3-201ENST00000425876 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
CDK3-201ENST00000425876 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
CDK3-201ENST00000425876 TSHZ3Q63HK5 1081 aa17.65■□□□□ 0.42
CDK3-201ENST00000425876 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
CDK3-201ENST00000425876 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
CDK3-201ENST00000425876 NUP98P52948 1817 aa17.65■□□□□ 0.42
CDK3-201ENST00000425876 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
CDK3-201ENST00000425876 CSF1RP07333 972 aa17.64■□□□□ 0.41
CDK3-201ENST00000425876 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
CDK3-201ENST00000425876 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
CDK3-201ENST00000425876 SIL1Q9H173 461 aa17.64■□□□□ 0.41
CDK3-201ENST00000425876 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
CDK3-201ENST00000425876 TNS1Q9HBL0 1735 aaKnown RBP17.63■□□□□ 0.41
CDK3-201ENST00000425876 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
CDK3-201ENST00000425876 AACSQ86V21 672 aa17.63■□□□□ 0.41
CDK3-201ENST00000425876 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
CDK3-201ENST00000425876 BTAF1O14981 1849 aa17.63■□□□□ 0.41
CDK3-201ENST00000425876 CIAO1O76071 339 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 RTL5Q5HYW3 569 aaPredicted RBP17.62■□□□□ 0.41
CDK3-201ENST00000425876 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 AK7Q96M32 723 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 REC8O95072 547 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 GPTP24298 496 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 BECN1Q14457 450 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 GPR108Q9NPR9 543 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
CDK3-201ENST00000425876 CHMP3Q9Y3E7 222 aa17.62■□□□□ 0.41
CDK3-201ENST00000425876 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
CDK3-201ENST00000425876 CLEC4GQ6UXB4 293 aa17.61■□□□□ 0.41
CDK3-201ENST00000425876 PTF1AQ7RTS3 328 aa17.61■□□□□ 0.41
CDK3-201ENST00000425876 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
CDK3-201ENST00000425876 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
CDK3-201ENST00000425876 UBN2Q6ZU65 1347 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 EYA2O00167 538 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 CHMLP26374 656 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 ATG9AQ7Z3C6 839 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
CDK3-201ENST00000425876 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
CDK3-201ENST00000425876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
CDK3-201ENST00000425876 TFCP2Q12800 502 aa17.59■□□□□ 0.41
CDK3-201ENST00000425876 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
CDK3-201ENST00000425876 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
CDK3-201ENST00000425876 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
CDK3-201ENST00000425876 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
CDK3-201ENST00000425876 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
CDK3-201ENST00000425876 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.41
CDK3-201ENST00000425876 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.41
CDK3-201ENST00000425876 PDE8AO60658 829 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms