RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SYNE4Q8N205 404 aa23.76■■□□□ 1.39
SMARCAL1-205ENST00000425815 PHAXQ9H814 394 aaKnown RBP23.76■■□□□ 1.39
SMARCAL1-205ENST00000425815 SALL2Q9Y467 1007 aaPredicted RBP23.76■■□□□ 1.39
SMARCAL1-205ENST00000425815 IL16Q14005 1332 aa23.75■■□□□ 1.39
SMARCAL1-205ENST00000425815 SLX4Q8IY92 1834 aa23.75■■□□□ 1.39
SMARCAL1-205ENST00000425815 HOXA10P31260 410 aaPredicted RBP23.74■■□□□ 1.39
SMARCAL1-205ENST00000425815 ISCA1Q9BUE6 129 aa23.74■■□□□ 1.39
SMARCAL1-205ENST00000425815 NMRK2Q9NPI5 230 aa23.74■■□□□ 1.39
SMARCAL1-205ENST00000425815 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
SMARCAL1-205ENST00000425815 ALDH1B1P30837 517 aa23.73■■□□□ 1.39
SMARCAL1-205ENST00000425815 LTBP3Q9NS15 1303 aa23.73■■□□□ 1.39
SMARCAL1-205ENST00000425815 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
SMARCAL1-205ENST00000425815 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
SMARCAL1-205ENST00000425815 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
SMARCAL1-205ENST00000425815 WDR63Q8IWG1 891 aa23.71■■□□□ 1.39
SMARCAL1-205ENST00000425815 TAOK3Q9H2K8 898 aa23.71■■□□□ 1.39
SMARCAL1-205ENST00000425815 ATP5J2-PTCD1G3V325 749 aa23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 CCDC30Q5VVM6 783 aa23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 SLC51AQ86UW1 340 aa23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 SPINK5Q9NQ38 1064 aaPredicted RBP23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 TRMT112Q9UI30 125 aaKnown RBP23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 SBF1O95248 1867 aa23.7■■□□□ 1.38
SMARCAL1-205ENST00000425815 ZC3H4Q9UPT8 1303 aaKnown RBP23.69■■□□□ 1.38
SMARCAL1-205ENST00000425815 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
SMARCAL1-205ENST00000425815 TRIM28Q13263 835 aaKnown RBP23.69■■□□□ 1.38
SMARCAL1-205ENST00000425815 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
SMARCAL1-205ENST00000425815 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
SMARCAL1-205ENST00000425815 RNF123Q5XPI4 1314 aa23.68■■□□□ 1.38
SMARCAL1-205ENST00000425815 RPGRQ92834 1020 aaKnown RBP23.68■■□□□ 1.38
SMARCAL1-205ENST00000425815 RBM17Q96I25 401 aaKnown RBP23.68■■□□□ 1.38
SMARCAL1-205ENST00000425815 FANCIQ9NVI1 1328 aa23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 GLTPD2A6NH11 291 aa23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 TCERG1O14776 1098 aaKnown RBP23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 TWISTNBQ3B726 338 aaPredicted RBP23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 RRAGCQ9HB90 399 aa23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 SNED1Q8TER0 1413 aa23.67■■□□□ 1.38
SMARCAL1-205ENST00000425815 SH3TC1Q8TE82 1336 aa23.66■■□□□ 1.38
SMARCAL1-205ENST00000425815 FKBP4Q02790 459 aaKnown RBP eCLIP23.66■■□□□ 1.38
SMARCAL1-205ENST00000425815 RIC3Q7Z5B4 369 aa23.66■■□□□ 1.38
SMARCAL1-205ENST00000425815 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
SMARCAL1-205ENST00000425815 FER1L6Q2WGJ9 1857 aa23.65■■□□□ 1.38
SMARCAL1-205ENST00000425815 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
SMARCAL1-205ENST00000425815 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
SMARCAL1-205ENST00000425815 VAMP4O75379 141 aa23.64■■□□□ 1.37
SMARCAL1-205ENST00000425815 GOLGA2Q08379 1002 aa23.64■■□□□ 1.37
SMARCAL1-205ENST00000425815 CHMP4AQ9BY43 222 aa23.64■■□□□ 1.37
SMARCAL1-205ENST00000425815 ZNF277Q9NRM2 450 aaPredicted RBP23.64■■□□□ 1.37
SMARCAL1-205ENST00000425815 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
SMARCAL1-205ENST00000425815 POTECB2RU33 542 aa23.63■■□□□ 1.37
SMARCAL1-205ENST00000425815 G2E3Q7L622 706 aa23.63■■□□□ 1.37
SMARCAL1-205ENST00000425815 MYD88Q99836 296 aa23.62■■□□□ 1.37
SMARCAL1-205ENST00000425815 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
SMARCAL1-205ENST00000425815 ABCC4O15439 1325 aa23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 TOMM70O94826 608 aa23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 SLC4A2P04920 1241 aa23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 CC2D2BQ6DHV5 1058 aa23.61■■□□□ 1.37
SMARCAL1-205ENST00000425815 RTL5Q5HYW3 569 aaPredicted RBP23.6■■□□□ 1.37
SMARCAL1-205ENST00000425815 PSMD1Q99460 953 aa23.6■■□□□ 1.37
SMARCAL1-205ENST00000425815 PI4KAP2A4QPH2 592 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 KSR2Q6VAB6 950 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 PI4KAP1Q8N8J0 262 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 MAP3K2Q9Y2U5 619 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 ATP6V0A2Q9Y487 856 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 ANKRD36CQ5JPF3 1778 aa23.59■■□□□ 1.37
SMARCAL1-205ENST00000425815 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 BBOX1O75936 387 aa23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 DDX58O95786 925 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 IGKV5-2P06315 115 aa23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 DPY19L2Q6NUT2 758 aa23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 ZBTB38Q8NAP3 1195 aaPredicted RBP23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 CCDC191Q8NCU4 936 aa23.58■■□□□ 1.37
SMARCAL1-205ENST00000425815 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
SMARCAL1-205ENST00000425815 DDNO94850 711 aaPredicted RBP23.57■■□□□ 1.36
SMARCAL1-205ENST00000425815 IARSP41252 1262 aaKnown RBP23.57■■□□□ 1.36
SMARCAL1-205ENST00000425815 JARID2Q92833 1246 aaPredicted RBP23.57■■□□□ 1.36
SMARCAL1-205ENST00000425815 VEGFAP15692 232 aaPredicted RBP23.56■■□□□ 1.36
SMARCAL1-205ENST00000425815 GRAPQ13588 217 aa23.56■■□□□ 1.36
SMARCAL1-205ENST00000425815 DDX46Q7L014 1031 aaKnown RBP23.56■■□□□ 1.36
SMARCAL1-205ENST00000425815 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
SMARCAL1-205ENST00000425815 GRAPLQ8TC17 118 aaPredicted RBP23.56■■□□□ 1.36
SMARCAL1-205ENST00000425815 PCCAP05165 728 aaPredicted RBP23.55■■□□□ 1.36
SMARCAL1-205ENST00000425815 GRIPAP1Q4V328 841 aa23.55■■□□□ 1.36
SMARCAL1-205ENST00000425815 SP8Q8IXZ3 490 aa23.55■■□□□ 1.36
SMARCAL1-205ENST00000425815 CCDC88AQ3V6T2 1871 aa23.54■■□□□ 1.36
SMARCAL1-205ENST00000425815 FZD9O00144 591 aa23.54■■□□□ 1.36
SMARCAL1-205ENST00000425815 HSPA6P17066 643 aa23.54■■□□□ 1.36
SMARCAL1-205ENST00000425815 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
SMARCAL1-205ENST00000425815 CWC25Q9NXE8 425 aaPredicted RBP23.54■■□□□ 1.36
SMARCAL1-205ENST00000425815 FLIIQ13045 1269 aa23.53■■□□□ 1.36
SMARCAL1-205ENST00000425815 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
SMARCAL1-205ENST00000425815 ZNF541Q9H0D2 1346 aa23.53■■□□□ 1.36
SMARCAL1-205ENST00000425815 CCER2I3L3R5 266 aa23.52■■□□□ 1.36
SMARCAL1-205ENST00000425815 C16orf71Q8IYS4 520 aaPredicted RBP23.52■■□□□ 1.36
SMARCAL1-205ENST00000425815 RTFDC1Q9BY42 306 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms