RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
TUBA4A-204ENST00000425551 ST5P78524 1137 aa13.25□□□□□ -0.29
TUBA4A-204ENST00000425551 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
TUBA4A-204ENST00000425551 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
TUBA4A-204ENST00000425551 GPRC5DQ9NZD1 345 aa13.25□□□□□ -0.29
TUBA4A-204ENST00000425551 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
TUBA4A-204ENST00000425551 GMPSP49915 693 aaPredicted RBP13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 HUNKP57058 714 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 CXCL9Q07325 125 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 SOGA3Q5TF21 947 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
TUBA4A-204ENST00000425551 POLR2AP24928 1970 aaKnown RBP13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 A0A087WZG4 1122 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 NPHP1O15259 732 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 CA12O43570 354 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 EIF6P56537 245 aaKnown RBP13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 AOC3Q16853 763 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 RTKN2Q8IZC4 609 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 PGAP2Q9UHJ9 254 aa13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 RANBP2P49792 3224 aaKnown RBP13.23□□□□□ -0.29
TUBA4A-204ENST00000425551 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 LMOD1P29536 600 aaPredicted RBP13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 IL6STP40189 918 aaPredicted RBP13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 PSMD1Q99460 953 aa13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
TUBA4A-204ENST00000425551 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
TUBA4A-204ENST00000425551 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
TUBA4A-204ENST00000425551 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
TUBA4A-204ENST00000425551 STARD3NLO95772 234 aa13.21□□□□□ -0.29
TUBA4A-204ENST00000425551 ADARB2Q9NS39 739 aaKnown RBP13.21□□□□□ -0.29
TUBA4A-204ENST00000425551 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 KIAA0100Q14667 2235 aaKnown RBP13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 RAD17O75943 681 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 TBC1D8O95759 1140 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 CTU1Q7Z7A3 348 aaKnown RBP13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 HHIPL1Q96JK4 782 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 SCAF8Q9UPN6 1271 aaKnown RBP13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 NIP7Q9Y221 180 aaKnown RBP eCLIP13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 COL6A3P12111 3177 aa13.2□□□□□ -0.3
TUBA4A-204ENST00000425551 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 NOGQ13253 232 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
TUBA4A-204ENST00000425551 CRY2Q49AN0 593 aa13.18□□□□□ -0.3
TUBA4A-204ENST00000425551 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
TUBA4A-204ENST00000425551 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
TUBA4A-204ENST00000425551 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
TUBA4A-204ENST00000425551 CAP1Q01518 475 aa13.16□□□□□ -0.3
TUBA4A-204ENST00000425551 PANK3Q9H999 370 aa13.16□□□□□ -0.3
TUBA4A-204ENST00000425551 DLL1O00548 723 aa13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 NIM1KQ8IY84 436 aa13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
TUBA4A-204ENST00000425551 SLC10A3P09131 477 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 TPTE2Q6XPS3 522 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
TUBA4A-204ENST00000425551 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 GPTP24298 496 aa13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
TUBA4A-204ENST00000425551 AKAP11Q9UKA4 1901 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 PRAMEF18Q5VWM3 479 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 TAF1P21675 1872 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 COL4A1P02462 1669 aa13.12□□□□□ -0.31
TUBA4A-204ENST00000425551 EN2P19622 333 aaPredicted RBP13.11□□□□□ -0.31
TUBA4A-204ENST00000425551 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
TUBA4A-204ENST00000425551 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms