RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 H7C1W4 665 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 GPTP24298 496 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
CALD1-206ENST00000424922 CHD1LQ86WJ1 897 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 APBB1O00213 710 aa18.58■□□□□ 0.57
CALD1-206ENST00000424922 GNPATO15228 680 aa18.58■□□□□ 0.57
CALD1-206ENST00000424922 CASP7P55210 303 aa18.58■□□□□ 0.57
CALD1-206ENST00000424922 POLA2Q14181 598 aa18.58■□□□□ 0.57
CALD1-206ENST00000424922 SMIM5Q71RC9 77 aa18.58■□□□□ 0.57
CALD1-206ENST00000424922 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
CALD1-206ENST00000424922 MTX1Q13505 466 aa18.58■□□□□ 0.56
CALD1-206ENST00000424922 EPHA10Q5JZY3 1008 aa18.58■□□□□ 0.56
CALD1-206ENST00000424922 EXOC6BQ9Y2D4 811 aa18.58■□□□□ 0.56
CALD1-206ENST00000424922 RPS6KA4O75676 772 aa18.57■□□□□ 0.56
CALD1-206ENST00000424922 SLC27A3Q5K4L6 730 aa18.56■□□□□ 0.56
CALD1-206ENST00000424922 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
CALD1-206ENST00000424922 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
CALD1-206ENST00000424922 RTCBQ9Y3I0 505 aaKnown RBP18.55■□□□□ 0.56
CALD1-206ENST00000424922 UBR3Q6ZT12 1888 aa18.55■□□□□ 0.56
CALD1-206ENST00000424922 MYH3P11055 1940 aa18.55■□□□□ 0.56
CALD1-206ENST00000424922 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
CALD1-206ENST00000424922 APBA3O96018 575 aa18.55■□□□□ 0.56
CALD1-206ENST00000424922 ZNF34Q8IZ26 560 aa18.55■□□□□ 0.56
CALD1-206ENST00000424922 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
CALD1-206ENST00000424922 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
CALD1-206ENST00000424922 FAM89AQ96GI7 184 aa18.54■□□□□ 0.56
CALD1-206ENST00000424922 AK7Q96M32 723 aa18.54■□□□□ 0.56
CALD1-206ENST00000424922 SMARCA5O60264 1052 aaPredicted RBP18.53■□□□□ 0.56
CALD1-206ENST00000424922 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
CALD1-206ENST00000424922 PCCAP05165 728 aaPredicted RBP18.53■□□□□ 0.56
CALD1-206ENST00000424922 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
CALD1-206ENST00000424922 PROM2Q8N271 834 aa18.53■□□□□ 0.56
CALD1-206ENST00000424922 UBN2Q6ZU65 1347 aa18.53■□□□□ 0.56
CALD1-206ENST00000424922 NBR1Q14596 966 aa18.53■□□□□ 0.56
CALD1-206ENST00000424922 ZBTB38Q8NAP3 1195 aaPredicted RBP18.53■□□□□ 0.56
CALD1-206ENST00000424922 FOXO4P98177 505 aa18.52■□□□□ 0.56
CALD1-206ENST00000424922 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
CALD1-206ENST00000424922 PLSCR1O15162 318 aa18.52■□□□□ 0.55
CALD1-206ENST00000424922 PHF14O94880 888 aa18.52■□□□□ 0.55
CALD1-206ENST00000424922 RABL6Q3YEC7 729 aaPredicted RBP18.52■□□□□ 0.55
CALD1-206ENST00000424922 SYNE4Q8N205 404 aa18.52■□□□□ 0.55
CALD1-206ENST00000424922 LMBR1LQ6UX01 489 aa18.51■□□□□ 0.55
CALD1-206ENST00000424922 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
CALD1-206ENST00000424922 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
CALD1-206ENST00000424922 TRMT112Q9UI30 125 aaKnown RBP18.51■□□□□ 0.55
CALD1-206ENST00000424922 PA2G4Q9UQ80 394 aaKnown RBP18.51■□□□□ 0.55
CALD1-206ENST00000424922 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
CALD1-206ENST00000424922 SEC24BO95487 1268 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 CLEC4GQ6UXB4 293 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
CALD1-206ENST00000424922 SRP68Q9UHB9 627 aaKnown RBP18.5■□□□□ 0.55
CALD1-206ENST00000424922 ZPR1O75312 459 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 TRAPPC3LQ5T215 181 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
CALD1-206ENST00000424922 C16orf71Q8IYS4 520 aaPredicted RBP18.5■□□□□ 0.55
CALD1-206ENST00000424922 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
CALD1-206ENST00000424922 CHMP3Q9Y3E7 222 aa18.49■□□□□ 0.55
CALD1-206ENST00000424922 RAB11FIP3O75154 756 aa18.49■□□□□ 0.55
CALD1-206ENST00000424922 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
CALD1-206ENST00000424922 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
CALD1-206ENST00000424922 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
CALD1-206ENST00000424922 RGPD3A6NKT7 1758 aaPredicted RBP18.48■□□□□ 0.55
CALD1-206ENST00000424922 RGPD4Q7Z3J3 1758 aa18.48■□□□□ 0.55
CALD1-206ENST00000424922 RFC4P35249 363 aa18.48■□□□□ 0.55
CALD1-206ENST00000424922 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
CALD1-206ENST00000424922 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
CALD1-206ENST00000424922 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
CALD1-206ENST00000424922 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
CALD1-206ENST00000424922 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
CALD1-206ENST00000424922 OTUD7AQ8TE49 926 aaPredicted RBP18.47■□□□□ 0.55
CALD1-206ENST00000424922 TBC1D32Q96NH3 1257 aa18.47■□□□□ 0.55
CALD1-206ENST00000424922 UTP14AQ9BVJ6 771 aaKnown RBP18.47■□□□□ 0.55
CALD1-206ENST00000424922 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
CALD1-206ENST00000424922 SIL1Q9H173 461 aa18.47■□□□□ 0.55
CALD1-206ENST00000424922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.46■□□□□ 0.55
CALD1-206ENST00000424922 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
CALD1-206ENST00000424922 RGL2O15211 777 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 ILDR1Q86SU0 546 aaPredicted RBP18.46■□□□□ 0.55
CALD1-206ENST00000424922 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
CALD1-206ENST00000424922 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 ADRA2BP18089 450 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.55
CALD1-206ENST00000424922 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
CALD1-206ENST00000424922 USP42Q9H9J4 1324 aaKnown RBP18.45■□□□□ 0.54
CALD1-206ENST00000424922 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
CALD1-206ENST00000424922 HMGB2P26583 209 aaKnown RBP18.45■□□□□ 0.54
CALD1-206ENST00000424922 PTPN12Q05209 780 aaKnown RBP18.45■□□□□ 0.54
CALD1-206ENST00000424922 G3BP1Q13283 466 aaKnown RBP eCLIP18.45■□□□□ 0.548e-9■□□□□ 9.6
CALD1-206ENST00000424922 LAMB2P55268 1798 aa18.45■□□□□ 0.54
CALD1-206ENST00000424922 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
CALD1-206ENST00000424922 BECN1Q14457 450 aa18.44■□□□□ 0.54
CALD1-206ENST00000424922 CCDC85AQ96PX6 553 aaPredicted RBP18.44■□□□□ 0.54
CALD1-206ENST00000424922 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms