RNA–Protein interactions for RNA: ENST00000424600.5

AFF3-207, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-207ENST00000424600 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
AFF3-207ENST00000424600 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
AFF3-207ENST00000424600 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
AFF3-207ENST00000424600 NPHP1O15259 732 aa20.33■□□□□ 0.85
AFF3-207ENST00000424600 NPR1P16066 1061 aa20.33■□□□□ 0.85
AFF3-207ENST00000424600 SLC10A5Q5PT55 438 aa20.33■□□□□ 0.85
AFF3-207ENST00000424600 CCDC30Q5VVM6 783 aa20.33■□□□□ 0.85
AFF3-207ENST00000424600 C3orf67Q6ZVT6 689 aa20.33■□□□□ 0.85
AFF3-207ENST00000424600 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
AFF3-207ENST00000424600 NFKBIEO00221 500 aa20.32■□□□□ 0.84
AFF3-207ENST00000424600 VAMP4O75379 141 aa20.32■□□□□ 0.84
AFF3-207ENST00000424600 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
AFF3-207ENST00000424600 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
AFF3-207ENST00000424600 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
AFF3-207ENST00000424600 RASSF7Q02833 373 aa20.31■□□□□ 0.84
AFF3-207ENST00000424600 TRIM28Q13263 835 aaKnown RBP20.31■□□□□ 0.84
AFF3-207ENST00000424600 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
AFF3-207ENST00000424600 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
AFF3-207ENST00000424600 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
AFF3-207ENST00000424600 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
AFF3-207ENST00000424600 TAF1P21675 1872 aa20.3■□□□□ 0.84
AFF3-207ENST00000424600 C21orf2O43822 256 aa20.29■□□□□ 0.84
AFF3-207ENST00000424600 HOXA10P31260 410 aaPredicted RBP20.29■□□□□ 0.84
AFF3-207ENST00000424600 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
AFF3-207ENST00000424600 C9orf131Q5VYM1 1079 aa20.28■□□□□ 0.84
AFF3-207ENST00000424600 G2E3Q7L622 706 aa20.28■□□□□ 0.84
AFF3-207ENST00000424600 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
AFF3-207ENST00000424600 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
AFF3-207ENST00000424600 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
AFF3-207ENST00000424600 GOLGA2Q08379 1002 aa20.27■□□□□ 0.84
AFF3-207ENST00000424600 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
AFF3-207ENST00000424600 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.83
AFF3-207ENST00000424600 COL4A1P02462 1669 aa20.26■□□□□ 0.83
AFF3-207ENST00000424600 MIER1Q8N108 512 aa20.26■□□□□ 0.83
AFF3-207ENST00000424600 MYH16Q9H6N6 1097 aa20.26■□□□□ 0.83
AFF3-207ENST00000424600 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
AFF3-207ENST00000424600 RIC3Q7Z5B4 369 aa20.25■□□□□ 0.83
AFF3-207ENST00000424600 SLC51AQ86UW1 340 aa20.25■□□□□ 0.83
AFF3-207ENST00000424600 METTL22Q9BUU2 404 aaPredicted RBP20.25■□□□□ 0.83
AFF3-207ENST00000424600 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
AFF3-207ENST00000424600 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
AFF3-207ENST00000424600 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
AFF3-207ENST00000424600 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
AFF3-207ENST00000424600 ALDH1B1P30837 517 aa20.24■□□□□ 0.83
AFF3-207ENST00000424600 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
AFF3-207ENST00000424600 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
AFF3-207ENST00000424600 RNF181Q9P0P0 153 aa20.24■□□□□ 0.83
AFF3-207ENST00000424600 ZNF219Q9P2Y4 722 aaPredicted RBP20.24■□□□□ 0.83
AFF3-207ENST00000424600 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 LRRC37AA6NMS7 1700 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 LMNB1P20700 586 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
AFF3-207ENST00000424600 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
AFF3-207ENST00000424600 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
AFF3-207ENST00000424600 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
AFF3-207ENST00000424600 FAM89AQ96GI7 184 aa20.22■□□□□ 0.83
AFF3-207ENST00000424600 MYD88Q99836 296 aa20.22■□□□□ 0.83
AFF3-207ENST00000424600 MAP3K2Q9Y2U5 619 aa20.22■□□□□ 0.83
AFF3-207ENST00000424600 MYH3P11055 1940 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
AFF3-207ENST00000424600 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 FLIIQ13045 1269 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 CCDC191Q8NCU4 936 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 ABCC4O15439 1325 aa20.21■□□□□ 0.83
AFF3-207ENST00000424600 ZC3H4Q9UPT8 1303 aaKnown RBP20.21■□□□□ 0.83
AFF3-207ENST00000424600 CCDC93Q567U6 631 aa20.2■□□□□ 0.82
AFF3-207ENST00000424600 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
AFF3-207ENST00000424600 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
AFF3-207ENST00000424600 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.82
AFF3-207ENST00000424600 E9PSI1 815 aa20.19■□□□□ 0.82
AFF3-207ENST00000424600 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
AFF3-207ENST00000424600 RBM17Q96I25 401 aaKnown RBP20.19■□□□□ 0.82
AFF3-207ENST00000424600 COL4A5P29400 1685 aa20.19■□□□□ 0.82
AFF3-207ENST00000424600 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
AFF3-207ENST00000424600 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
AFF3-207ENST00000424600 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
AFF3-207ENST00000424600 LTBP1Q14766 1721 aa20.18■□□□□ 0.82
AFF3-207ENST00000424600 KIF3CO14782 793 aa20.17■□□□□ 0.82
AFF3-207ENST00000424600 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
AFF3-207ENST00000424600 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
AFF3-207ENST00000424600 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
AFF3-207ENST00000424600 NEURL1BA8MQ27 555 aa20.16■□□□□ 0.82
AFF3-207ENST00000424600 IRS4O14654 1257 aaPredicted RBP20.16■□□□□ 0.82
AFF3-207ENST00000424600 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
AFF3-207ENST00000424600 PSMD1Q99460 953 aa20.16■□□□□ 0.82
AFF3-207ENST00000424600 DUOX1Q9NRD9 1551 aa20.16■□□□□ 0.82
AFF3-207ENST00000424600 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
AFF3-207ENST00000424600 PPEF1O14829 653 aaPredicted RBP20.15■□□□□ 0.82
AFF3-207ENST00000424600 CWF19L2Q2TBE0 894 aaKnown RBP20.15■□□□□ 0.82
AFF3-207ENST00000424600 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
AFF3-207ENST00000424600 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
AFF3-207ENST00000424600 FKBP5Q13451 457 aaPredicted RBP20.14■□□□□ 0.81
AFF3-207ENST00000424600 GRAPQ13588 217 aa20.14■□□□□ 0.81
AFF3-207ENST00000424600 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
AFF3-207ENST00000424600 GRAPLQ8TC17 118 aaPredicted RBP20.14■□□□□ 0.81
AFF3-207ENST00000424600 DNAAF4Q8WXU2 420 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms