RNA–Protein interactions for RNA: ENST00000423855.6

RNPC3-201, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RNPC3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-201ENST00000423855 GPTP24298 496 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
RNPC3-201ENST00000423855 HDAC1Q13547 482 aaPredicted RBP11.66□□□□□ -0.54
RNPC3-201ENST00000423855 PDE4AP27815 886 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 CASP7P55210 303 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 NLRP10Q86W26 655 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
RNPC3-201ENST00000423855 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNPC3-201ENST00000423855 CWC25Q9NXE8 425 aaPredicted RBP11.66□□□□□ -0.54
RNPC3-201ENST00000423855 RGL2O15211 777 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 GNAI3P08754 354 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 UBTFL1P0CB47 393 aaPredicted RBP11.65□□□□□ -0.54
RNPC3-201ENST00000423855 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 KAZALD1Q96I82 304 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
RNPC3-201ENST00000423855 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 RFC4P35249 363 aa11.64□□□□□ -0.55
RNPC3-201ENST00000423855 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
RNPC3-201ENST00000423855 SIRT2Q8IXJ6 389 aa11.64□□□□□ -0.55
RNPC3-201ENST00000423855 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 RWDD1Q9H446 243 aaPredicted RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 C9orf78Q9NZ63 289 aaPredicted RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
RNPC3-201ENST00000423855 LRRFIP2Q9Y608 721 aaKnown RBP11.64□□□□□ -0.55
RNPC3-201ENST00000423855 ZPR1O75312 459 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 GNAI2P04899 355 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 UBE3BQ7Z3V4 1068 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
RNPC3-201ENST00000423855 H7C1W4 665 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 GYS1P13807 737 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 SLC15A2Q16348 729 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 CEP85Q6P2H3 762 aa11.63□□□□□ -0.55
RNPC3-201ENST00000423855 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNPC3-201ENST00000423855 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
RNPC3-201ENST00000423855 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
RNPC3-201ENST00000423855 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
RNPC3-201ENST00000423855 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
RNPC3-201ENST00000423855 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
RNPC3-201ENST00000423855 NRXN2Q9P2S2 1712 aa11.62□□□□□ -0.55
RNPC3-201ENST00000423855 NTSR2O95665 410 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 SUSD4Q5VX71 490 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 FAM89AQ96GI7 184 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
RNPC3-201ENST00000423855 PARP10Q53GL7 1025 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 ZBTB38Q8NAP3 1195 aaPredicted RBP11.61□□□□□ -0.55
RNPC3-201ENST00000423855 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
RNPC3-201ENST00000423855 STK32BQ9NY57 414 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
RNPC3-201ENST00000423855 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 NFIXQ14938 502 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 PDGFDQ9GZP0 370 aaPredicted RBP11.6□□□□□ -0.55
RNPC3-201ENST00000423855 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
RNPC3-201ENST00000423855 CDHR2Q9BYE9 1310 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 MTX1Q13505 466 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
RNPC3-201ENST00000423855 ANKRD31Q8N7Z5 1873 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 FOXO4P98177 505 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
RNPC3-201ENST00000423855 RABL6Q3YEC7 729 aaPredicted RBP11.59□□□□□ -0.55
RNPC3-201ENST00000423855 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
RNPC3-201ENST00000423855 COL4A1P02462 1669 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 SH3TC1Q8TE82 1336 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 DDR1Q08345 913 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 NUTM1Q86Y26 1132 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 SETDB2Q96T68 719 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
RNPC3-201ENST00000423855 TAF1P21675 1872 aa11.58□□□□□ -0.56
RNPC3-201ENST00000423855 TM4SF1P30408 202 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 LRP5O75197 1615 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
RNPC3-201ENST00000423855 SRGAP3O43295 1099 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 RGS3P49796 1198 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 POLA2Q14181 598 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 SSH3Q8TE77 659 aa11.57□□□□□ -0.56
RNPC3-201ENST00000423855 POLRMTO00411 1230 aaKnown RBP11.56□□□□□ -0.56
RNPC3-201ENST00000423855 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
RNPC3-201ENST00000423855 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
RNPC3-201ENST00000423855 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
RNPC3-201ENST00000423855 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
RNPC3-201ENST00000423855 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
RNPC3-201ENST00000423855 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms