RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
CTCFL-203ENST00000422109 PDIA6Q15084 440 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
CTCFL-203ENST00000422109 F13A1P00488 732 aa16.49■□□□□ 0.23
CTCFL-203ENST00000422109 FOSBP53539 338 aa16.49■□□□□ 0.23
CTCFL-203ENST00000422109 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
CTCFL-203ENST00000422109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.49■□□□□ 0.23
CTCFL-203ENST00000422109 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
CTCFL-203ENST00000422109 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 MTX1Q13505 466 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 ARID3AQ99856 593 aa16.48■□□□□ 0.23
CTCFL-203ENST00000422109 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.48■□□□□ 0.23
CTCFL-203ENST00000422109 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
CTCFL-203ENST00000422109 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 ADGRL3Q9HAR2 1447 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
CTCFL-203ENST00000422109 LRRC2Q9BYS8 371 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
CTCFL-203ENST00000422109 SLC27A2O14975 620 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
CTCFL-203ENST00000422109 ST3GAL1Q11201 340 aa16.47■□□□□ 0.23
CTCFL-203ENST00000422109 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
CTCFL-203ENST00000422109 ERBB3P21860 1342 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 TFCP2Q12800 502 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 GCKRQ14397 625 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 LARP1BQ659C4 914 aaKnown RBP16.46■□□□□ 0.23
CTCFL-203ENST00000422109 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 ANKRD13DQ6ZTN6 518 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
CTCFL-203ENST00000422109 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
CTCFL-203ENST00000422109 CAMK4Q16566 473 aa16.45■□□□□ 0.22
CTCFL-203ENST00000422109 ZSWIM6Q9HCJ5 1215 aa16.45■□□□□ 0.22
CTCFL-203ENST00000422109 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
CTCFL-203ENST00000422109 VPS53Q5VIR6 699 aa16.45■□□□□ 0.22
CTCFL-203ENST00000422109 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
CTCFL-203ENST00000422109 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
CTCFL-203ENST00000422109 HSP90AA2PQ14568 343 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-203ENST00000422109 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-203ENST00000422109 NPHP3Q7Z494 1330 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 A0A087WZG4 1122 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 C17orf53Q8N3J3 647 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-203ENST00000422109 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
CTCFL-203ENST00000422109 PHF14O94880 888 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 PHKG2P15735 406 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
CTCFL-203ENST00000422109 KDM3BQ7LBC6 1761 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 HDAC5Q9UQL6 1122 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
CTCFL-203ENST00000422109 DNTTIP2Q5QJE6 756 aaKnown RBP16.43■□□□□ 0.22
CTCFL-203ENST00000422109 MAP4K1Q92918 833 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
CTCFL-203ENST00000422109 DBNLQ9UJU6 430 aaKnown RBP16.43■□□□□ 0.22
CTCFL-203ENST00000422109 UBE2HP62256 183 aa16.42■□□□□ 0.22
CTCFL-203ENST00000422109 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-203ENST00000422109 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
CTCFL-203ENST00000422109 MED1Q15648 1581 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-203ENST00000422109 OFD1O75665 1012 aa16.42■□□□□ 0.22
CTCFL-203ENST00000422109 FGD1P98174 961 aa16.42■□□□□ 0.22
CTCFL-203ENST00000422109 METTL22Q9BUU2 404 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-203ENST00000422109 CABP4P57796 275 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
CTCFL-203ENST00000422109 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-203ENST00000422109 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
CTCFL-203ENST00000422109 ADCY5O95622 1261 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 ATF3P18847 181 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.229e-7■■□□□ 11.8
CTCFL-203ENST00000422109 CYP27B1O15528 508 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 JAK2O60674 1132 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-203ENST00000422109 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
CTCFL-203ENST00000422109 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
CTCFL-203ENST00000422109 SPC24Q8NBT2 197 aa16.4■□□□□ 0.22
CTCFL-203ENST00000422109 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
CTCFL-203ENST00000422109 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
CTCFL-203ENST00000422109 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
CTCFL-203ENST00000422109 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
CTCFL-203ENST00000422109 RGPD5Q99666 1765 aa16.4■□□□□ 0.22
CTCFL-203ENST00000422109 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
CTCFL-203ENST00000422109 PSMA5P28066 241 aa16.39■□□□□ 0.21
CTCFL-203ENST00000422109 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
CTCFL-203ENST00000422109 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms