RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
UBXN11-208ENST00000421827 IL16Q14005 1332 aa23.35■■□□□ 1.33
UBXN11-208ENST00000421827 CACNA1SQ13698 1873 aa23.35■■□□□ 1.33
UBXN11-208ENST00000421827 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
UBXN11-208ENST00000421827 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
UBXN11-208ENST00000421827 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
UBXN11-208ENST00000421827 ZC3H4Q9UPT8 1303 aaKnown RBP23.34■■□□□ 1.33
UBXN11-208ENST00000421827 KIF3CO14782 793 aa23.34■■□□□ 1.33
UBXN11-208ENST00000421827 RPGRQ92834 1020 aaKnown RBP23.34■■□□□ 1.33
UBXN11-208ENST00000421827 TAOK3Q9H2K8 898 aa23.34■■□□□ 1.33
UBXN11-208ENST00000421827 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
UBXN11-208ENST00000421827 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
UBXN11-208ENST00000421827 ANKRD36CQ5JPF3 1778 aa23.33■■□□□ 1.33
UBXN11-208ENST00000421827 SLC10A5Q5PT55 438 aa23.33■■□□□ 1.33
UBXN11-208ENST00000421827 TSPYL6Q8N831 410 aa23.33■■□□□ 1.33
UBXN11-208ENST00000421827 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
UBXN11-208ENST00000421827 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
UBXN11-208ENST00000421827 CCDC93Q567U6 631 aa23.32■■□□□ 1.32
UBXN11-208ENST00000421827 CCDC30Q5VVM6 783 aa23.32■■□□□ 1.32
UBXN11-208ENST00000421827 NLRP3Q96P20 1036 aa23.32■■□□□ 1.32
UBXN11-208ENST00000421827 NMRK2Q9NPI5 230 aa23.32■■□□□ 1.32
UBXN11-208ENST00000421827 KDM2BQ8NHM5 1336 aa23.32■■□□□ 1.32
UBXN11-208ENST00000421827 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
UBXN11-208ENST00000421827 PHAXQ9H814 394 aaKnown RBP23.31■■□□□ 1.32
UBXN11-208ENST00000421827 TRMT112Q9UI30 125 aaKnown RBP23.31■■□□□ 1.32
UBXN11-208ENST00000421827 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
UBXN11-208ENST00000421827 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
UBXN11-208ENST00000421827 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
UBXN11-208ENST00000421827 ISCA1Q9BUE6 129 aa23.3■■□□□ 1.32
UBXN11-208ENST00000421827 CCDC88AQ3V6T2 1871 aa23.3■■□□□ 1.32
UBXN11-208ENST00000421827 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
UBXN11-208ENST00000421827 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
UBXN11-208ENST00000421827 CRAMP1Q96RY5 1269 aa23.29■■□□□ 1.32
UBXN11-208ENST00000421827 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
UBXN11-208ENST00000421827 ATP5J2-PTCD1G3V325 749 aa23.28■■□□□ 1.32
UBXN11-208ENST00000421827 RTKN2Q8IZC4 609 aa23.28■■□□□ 1.32
UBXN11-208ENST00000421827 SYNE4Q8N205 404 aa23.28■■□□□ 1.32
UBXN11-208ENST00000421827 HCLS1P14317 486 aaPredicted RBP23.27■■□□□ 1.32
UBXN11-208ENST00000421827 TWISTNBQ3B726 338 aaPredicted RBP23.27■■□□□ 1.32
UBXN11-208ENST00000421827 GLTPD2A6NH11 291 aa23.26■■□□□ 1.31
UBXN11-208ENST00000421827 FKBP4Q02790 459 aaKnown RBP eCLIP23.26■■□□□ 1.31
UBXN11-208ENST00000421827 TRIM28Q13263 835 aaKnown RBP23.26■■□□□ 1.31
UBXN11-208ENST00000421827 ZNF428Q96B54 188 aa23.26■■□□□ 1.31
UBXN11-208ENST00000421827 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
UBXN11-208ENST00000421827 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
UBXN11-208ENST00000421827 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
UBXN11-208ENST00000421827 CC2D2BQ6DHV5 1058 aa23.25■■□□□ 1.31
UBXN11-208ENST00000421827 STK31Q9BXU1 1019 aa23.25■■□□□ 1.31
UBXN11-208ENST00000421827 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
UBXN11-208ENST00000421827 DICER1Q9UPY3 1922 aaKnown RBP23.24■■□□□ 1.31
UBXN11-208ENST00000421827 TOMM70O94826 608 aa23.24■■□□□ 1.31
UBXN11-208ENST00000421827 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
UBXN11-208ENST00000421827 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
UBXN11-208ENST00000421827 FAM89AQ96GI7 184 aa23.23■■□□□ 1.31
UBXN11-208ENST00000421827 ZNF277Q9NRM2 450 aaPredicted RBP23.23■■□□□ 1.31
UBXN11-208ENST00000421827 TCERG1O14776 1098 aaKnown RBP23.22■■□□□ 1.31
UBXN11-208ENST00000421827 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
UBXN11-208ENST00000421827 MYD88Q99836 296 aa23.22■■□□□ 1.31
UBXN11-208ENST00000421827 ABCC4O15439 1325 aa23.22■■□□□ 1.31
UBXN11-208ENST00000421827 GRIPAP1Q4V328 841 aa23.21■■□□□ 1.31
UBXN11-208ENST00000421827 PSMD1Q99460 953 aa23.21■■□□□ 1.31
UBXN11-208ENST00000421827 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
UBXN11-208ENST00000421827 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
UBXN11-208ENST00000421827 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
UBXN11-208ENST00000421827 EXOSC9Q06265 439 aaKnown RBP23.19■■□□□ 1.3
UBXN11-208ENST00000421827 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
UBXN11-208ENST00000421827 KSR2Q6VAB6 950 aa23.19■■□□□ 1.3
UBXN11-208ENST00000421827 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
UBXN11-208ENST00000421827 MYH16Q9H6N6 1097 aa23.19■■□□□ 1.3
UBXN11-208ENST00000421827 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
UBXN11-208ENST00000421827 LAMB2P55268 1798 aa23.19■■□□□ 1.3
UBXN11-208ENST00000421827 VAMP4O75379 141 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 BBOX1O75936 387 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 SLC4A2P04920 1241 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
UBXN11-208ENST00000421827 IARSP41252 1262 aaKnown RBP23.18■■□□□ 1.3
UBXN11-208ENST00000421827 SLC51AQ86UW1 340 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
UBXN11-208ENST00000421827 CCDC191Q8NCU4 936 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 RBM46Q8TBY0 533 aaKnown RBP23.18■■□□□ 1.3
UBXN11-208ENST00000421827 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
UBXN11-208ENST00000421827 ATP6V0A2Q9Y487 856 aa23.18■■□□□ 1.3
UBXN11-208ENST00000421827 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
UBXN11-208ENST00000421827 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
UBXN11-208ENST00000421827 G2E3Q7L622 706 aa23.17■■□□□ 1.3
UBXN11-208ENST00000421827 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
UBXN11-208ENST00000421827 DDX60Q8IY21 1712 aaKnown RBP23.16■■□□□ 1.3
UBXN11-208ENST00000421827 HSPA6P17066 643 aa23.16■■□□□ 1.3
UBXN11-208ENST00000421827 GRAPQ13588 217 aa23.16■■□□□ 1.3
UBXN11-208ENST00000421827 SF3B3Q15393 1217 aaKnown RBP23.16■■□□□ 1.3
UBXN11-208ENST00000421827 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
UBXN11-208ENST00000421827 CWC25Q9NXE8 425 aaPredicted RBP23.16■■□□□ 1.3
UBXN11-208ENST00000421827 ZNF521Q96K83 1311 aa23.14■■□□□ 1.3
UBXN11-208ENST00000421827 POTECB2RU33 542 aa23.14■■□□□ 1.29
UBXN11-208ENST00000421827 DDNO94850 711 aaPredicted RBP23.14■■□□□ 1.29
UBXN11-208ENST00000421827 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.29
UBXN11-208ENST00000421827 HSP90B1P14625 803 aaKnown RBP23.14■■□□□ 1.29
UBXN11-208ENST00000421827 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
UBXN11-208ENST00000421827 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
UBXN11-208ENST00000421827 NEXNQ0ZGT2 675 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms