RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
LINC00899-201ENST00000421538 TRIM6-TRIM34B2RNG4 842 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 GIGYF1O75420 1035 aaPredicted RBP16.68■□□□□ 0.26
LINC00899-201ENST00000421538 TPM3P06753 285 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 HOXB7P09629 217 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 ANKRD7Q92527 254 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 CHMLP26374 656 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
LINC00899-201ENST00000421538 FEZ1Q99689 392 aa16.67■□□□□ 0.26
LINC00899-201ENST00000421538 IL25Q9H293 177 aa16.67■□□□□ 0.26
LINC00899-201ENST00000421538 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
LINC00899-201ENST00000421538 ANAPC15P60006 121 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 TMEM87AQ8NBN3 555 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
LINC00899-201ENST00000421538 UPF3BQ9BZI7 483 aaKnown RBP16.66■□□□□ 0.26
LINC00899-201ENST00000421538 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 EVA1CP58658 441 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
LINC00899-201ENST00000421538 PLEKHG2Q9H7P9 1386 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
LINC00899-201ENST00000421538 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 ZNF771Q7L3S4 317 aaPredicted RBP16.65■□□□□ 0.26
LINC00899-201ENST00000421538 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 PYCARDQ9ULZ3 195 aa16.65■□□□□ 0.26
LINC00899-201ENST00000421538 GNAI3P08754 354 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 IGSF3O75054 1194 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 UBE2HP62256 183 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
LINC00899-201ENST00000421538 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
LINC00899-201ENST00000421538 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
LINC00899-201ENST00000421538 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
LINC00899-201ENST00000421538 PARP4Q9UKK3 1724 aaKnown RBP16.63■□□□□ 0.25
LINC00899-201ENST00000421538 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
LINC00899-201ENST00000421538 IL2RBP14784 551 aa16.63■□□□□ 0.25
LINC00899-201ENST00000421538 KCNF1Q9H3M0 494 aa16.63■□□□□ 0.25
LINC00899-201ENST00000421538 MRC1P22897 1456 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 NUTM1Q86Y26 1132 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 TCHHQ07283 1943 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 SPC24Q8NBT2 197 aa16.62■□□□□ 0.25
LINC00899-201ENST00000421538 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
LINC00899-201ENST00000421538 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
LINC00899-201ENST00000421538 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
LINC00899-201ENST00000421538 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
LINC00899-201ENST00000421538 PCDH11XQ9BZA7 1347 aa16.6■□□□□ 0.25
LINC00899-201ENST00000421538 PCDH11YQ9BZA8 1340 aa16.6■□□□□ 0.25
LINC00899-201ENST00000421538 C5P01031 1676 aa16.6■□□□□ 0.25
LINC00899-201ENST00000421538 RPAP1Q9BWH6 1393 aaPredicted RBP16.6■□□□□ 0.25
LINC00899-201ENST00000421538 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
LINC00899-201ENST00000421538 CABP4P57796 275 aa16.6■□□□□ 0.25
LINC00899-201ENST00000421538 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
LINC00899-201ENST00000421538 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
LINC00899-201ENST00000421538 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 ADCY9O60503 1353 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 PDIA6Q15084 440 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 PXDNLA1KZ92 1463 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 ZSCAN22P10073 491 aaPredicted RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 GABPB1Q06547 395 aaPredicted RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 CGNQ9P2M7 1197 aaKnown RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
LINC00899-201ENST00000421538 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
LINC00899-201ENST00000421538 FIBPO43427 364 aa16.58■□□□□ 0.25
LINC00899-201ENST00000421538 UBTFL1P0CB47 393 aaPredicted RBP16.58■□□□□ 0.25
LINC00899-201ENST00000421538 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.25
LINC00899-201ENST00000421538 FUCA2Q9BTY2 467 aa16.58■□□□□ 0.25
LINC00899-201ENST00000421538 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.24
LINC00899-201ENST00000421538 AP5Z1O43299 807 aa16.58■□□□□ 0.24
LINC00899-201ENST00000421538 SYCP1Q15431 976 aa16.58■□□□□ 0.24
LINC00899-201ENST00000421538 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
LINC00899-201ENST00000421538 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
LINC00899-201ENST00000421538 USP16Q9Y5T5 823 aa16.58■□□□□ 0.24
LINC00899-201ENST00000421538 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
LINC00899-201ENST00000421538 HSPA4P34932 840 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 PIP4K2BP78356 416 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
LINC00899-201ENST00000421538 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
LINC00899-201ENST00000421538 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
LINC00899-201ENST00000421538 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
LINC00899-201ENST00000421538 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00899-201ENST00000421538 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
LINC00899-201ENST00000421538 STX6O43752 255 aa16.56■□□□□ 0.24
LINC00899-201ENST00000421538 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
LINC00899-201ENST00000421538 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
LINC00899-201ENST00000421538 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
LINC00899-201ENST00000421538 PHLPP1O60346 1717 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms