RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 NMIQ13287 307 aaPredicted RBP18.94■□□□□ 0.62
TRIM13-204ENST00000420995 CAMK4Q16566 473 aa18.94■□□□□ 0.62
TRIM13-204ENST00000420995 TAF6LQ9Y6J9 622 aa18.94■□□□□ 0.62
TRIM13-204ENST00000420995 PRAMEF22A3QJZ6 481 aa18.93■□□□□ 0.62
TRIM13-204ENST00000420995 ZNF530Q6P9A1 599 aaPredicted RBP18.93■□□□□ 0.62
TRIM13-204ENST00000420995 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
TRIM13-204ENST00000420995 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
TRIM13-204ENST00000420995 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
TRIM13-204ENST00000420995 TLR7Q9NYK1 1049 aaKnown RBP18.93■□□□□ 0.62
TRIM13-204ENST00000420995 CCDC192P0DO97 292 aa18.92■□□□□ 0.62
TRIM13-204ENST00000420995 LIG1P18858 919 aa18.92■□□□□ 0.62
TRIM13-204ENST00000420995 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
TRIM13-204ENST00000420995 EAF2Q96CJ1 260 aaPredicted RBP18.92■□□□□ 0.62
TRIM13-204ENST00000420995 IP6K1Q92551 441 aa18.92■□□□□ 0.62
TRIM13-204ENST00000420995 A0A0D9SFI3 127 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 SLC27A2O14975 620 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 KRT85P78386 507 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 ERC1Q8IUD2 1116 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 KIAA1524Q8TCG1 905 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 MAP4K1Q92918 833 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 SASH1O94885 1247 aa18.91■□□□□ 0.62
TRIM13-204ENST00000420995 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 SIL1Q9H173 461 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 KDM3BQ7LBC6 1761 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 GTF2F1P35269 517 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■□□□ 11.9
TRIM13-204ENST00000420995 LUZP1Q86V48 1076 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 CKAP2LQ8IYA6 745 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 KAZALD1Q96I82 304 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 NUP62CLQ9H1M0 184 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 BOLA2Q9H3K6 86 aa18.9■□□□□ 0.62
TRIM13-204ENST00000420995 ALDH1L1O75891 902 aa18.89■□□□□ 0.62
TRIM13-204ENST00000420995 KSR2Q6VAB6 950 aa18.89■□□□□ 0.62
TRIM13-204ENST00000420995 BICC1Q9H694 974 aaKnown RBP18.89■□□□□ 0.62
TRIM13-204ENST00000420995 MAP3K11Q16584 847 aa18.89■□□□□ 0.61
TRIM13-204ENST00000420995 AKAP4Q5JQC9 854 aa18.89■□□□□ 0.61
TRIM13-204ENST00000420995 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
TRIM13-204ENST00000420995 MRVI1Q9Y6F6 885 aa18.89■□□□□ 0.61
TRIM13-204ENST00000420995 GIGYF1O75420 1035 aaPredicted RBP18.88■□□□□ 0.61
TRIM13-204ENST00000420995 TYRO3Q06418 890 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 STK3Q13188 491 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
TRIM13-204ENST00000420995 KIF3AQ9Y496 699 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
TRIM13-204ENST00000420995 KLHDC4Q8TBB5 520 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 FSD1Q9BTV5 496 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
TRIM13-204ENST00000420995 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 PRDM10Q9NQV6 1147 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 DACT1Q9NYF0 836 aa18.88■□□□□ 0.61
TRIM13-204ENST00000420995 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 BLOC1S2Q6QNY1 142 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 ZNF589Q86UQ0 364 aaPredicted RBP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 PXDNQ92626 1479 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 LTN1O94822 1766 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 GRM8O00222 908 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 PTGS1P23219 599 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 PSMA5P28066 241 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 TOB2Q14106 344 aaPredicted RBP18.87■□□□□ 0.61
TRIM13-204ENST00000420995 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
TRIM13-204ENST00000420995 RNMTO43148 476 aaKnown RBP18.86■□□□□ 0.61
TRIM13-204ENST00000420995 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
TRIM13-204ENST00000420995 ELP1O95163 1332 aa18.86■□□□□ 0.61
TRIM13-204ENST00000420995 RPS6KB1P23443 525 aa18.86■□□□□ 0.61
TRIM13-204ENST00000420995 TNMDQ9H2S6 317 aa18.86■□□□□ 0.61
TRIM13-204ENST00000420995 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
TRIM13-204ENST00000420995 HIP1O00291 1037 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 PDCP20941 246 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 ANO6Q4KMQ2 910 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 SPATA32Q96LK8 384 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
TRIM13-204ENST00000420995 KLHL34Q8N239 644 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 LINS1Q8NG48 757 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 PRDM4Q9UKN5 801 aa18.85■□□□□ 0.61
TRIM13-204ENST00000420995 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 NFAT5O94916 1531 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 GOLGA6L4A6NEF3 574 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 RNF20Q5VTR2 975 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 CBX8Q9HC52 389 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 MED23Q9ULK4 1368 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 RIOK3O14730 519 aaKnown RBP18.84■□□□□ 0.61
TRIM13-204ENST00000420995 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
TRIM13-204ENST00000420995 JAK2O60674 1132 aa18.83■□□□□ 0.61
TRIM13-204ENST00000420995 TPM3P06753 285 aa18.83■□□□□ 0.61
TRIM13-204ENST00000420995 LEO1Q8WVC0 666 aaPredicted RBP18.83■□□□□ 0.61
TRIM13-204ENST00000420995 LRMPQ12912 555 aa18.83■□□□□ 0.6
TRIM13-204ENST00000420995 ANKRD1Q15327 319 aa18.83■□□□□ 0.6
TRIM13-204ENST00000420995 SCAND2PQ9GZW5 306 aaPredicted RBP18.83■□□□□ 0.6
TRIM13-204ENST00000420995 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 NPHP3Q7Z494 1330 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 NR1I2O75469 434 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 CHGBP05060 677 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 CCDC186Q7Z3E2 898 aa18.82■□□□□ 0.6
TRIM13-204ENST00000420995 SMAP1Q8IYB5 467 aaPredicted RBP18.82■□□□□ 0.6
TRIM13-204ENST00000420995 NRBP1Q9UHY1 535 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms