RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 ZNF165P49910 485 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 MTRF1LQ9UGC7 380 aaKnown RBP10.56□□□□□ -0.72
PCDH19-203ENST00000420881 TMEM266Q2M3C6 531 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
PCDH19-203ENST00000420881 MRPS9P82933 396 aaKnown RBP10.56□□□□□ -0.72
PCDH19-203ENST00000420881 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 FAN1Q9Y2M0 1017 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 TTC21AQ8NDW8 1320 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 COG7P83436 770 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 GKAP1Q5VSY0 366 aaPredicted RBP10.56□□□□□ -0.72
PCDH19-203ENST00000420881 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 GSDMBQ8TAX9 411 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
PCDH19-203ENST00000420881 RPGRIP1LQ68CZ1 1315 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 STXBP4Q6ZWJ1 553 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 NKIRAS1Q9NYS0 192 aa10.56□□□□□ -0.72
PCDH19-203ENST00000420881 Q9H521 79 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 TXNDC16Q9P2K2 825 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 VGLL3A8MV65 326 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 ARL1P40616 181 aaPredicted RBP10.55□□□□□ -0.72
PCDH19-203ENST00000420881 MICAL1Q8TDZ2 1067 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 ZNF287Q9HBT7 754 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 UBASH3AP57075 661 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 NLRP5P59047 1200 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 KRT83P78385 493 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 TUBB2AQ13885 445 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 SLC4A8Q2Y0W8 1093 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 MCUR1Q96AQ8 359 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 TUBB2BQ9BVA1 445 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 TACC3Q9Y6A5 838 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 NDUFAB1O14561 156 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 KRT86O43790 486 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
PCDH19-203ENST00000420881 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 KLHL40Q2TBA0 621 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
PCDH19-203ENST00000420881 ARHGEF2Q92974 986 aaKnown RBP10.55□□□□□ -0.72
PCDH19-203ENST00000420881 DNAI1Q9UI46 699 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 HSP90AA5PQ58FG0 334 aa10.55□□□□□ -0.72
PCDH19-203ENST00000420881 SDCCAG8Q86SQ7 713 aaPredicted RBP10.54□□□□□ -0.72
PCDH19-203ENST00000420881 CPLX3Q8WVH0 158 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 NCAPGQ9BPX3 1015 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 SKILP12757 684 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 CROCCP2Q86T23 111 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 PPM1FP49593 454 aaPredicted RBP10.54□□□□□ -0.72
PCDH19-203ENST00000420881 SNX16P57768 344 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 GGT6Q6P531 493 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 KIF6Q6ZMV9 814 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 RMND1Q9NWS8 449 aa10.54□□□□□ -0.72
PCDH19-203ENST00000420881 FAF1Q9UNN5 650 aaPredicted RBP10.54□□□□□ -0.72
PCDH19-203ENST00000420881 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 VIMP08670 466 aaKnown RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 ZSCAN23Q3MJ62 389 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 LRRC27Q9C0I9 530 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 XAB2Q9HCS7 855 aaKnown RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 SATB2Q9UPW6 733 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 A0A087WZG4 1122 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 CEP104O60308 925 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 LRRC23Q53EV4 343 aaPredicted RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 NAA16Q6N069 864 aaPredicted RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 TAOK1Q7L7X3 1001 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 TNPO1Q92973 898 aaKnown RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 PPFIA1Q13136 1202 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 KCNK9Q9NPC2 374 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 PDCD2Q16342 344 aaPredicted RBP10.53□□□□□ -0.72
PCDH19-203ENST00000420881 GSTA5Q7RTV2 222 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 CKAP2LQ8IYA6 745 aa10.53□□□□□ -0.72
PCDH19-203ENST00000420881 KRT13P13646 458 aa10.52□□□□□ -0.72
PCDH19-203ENST00000420881 FSIP1Q8NA03 581 aa10.52□□□□□ -0.72
PCDH19-203ENST00000420881 LRRD1A4D1F6 860 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
PCDH19-203ENST00000420881 CCDC65Q8IXS2 484 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 GPR161Q8N6U8 529 aaKnown RBP10.52□□□□□ -0.73
PCDH19-203ENST00000420881 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 MYO1BO43795 1136 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 CALML4Q96GE6 196 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 GOLGA6CA6NDK9 693 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 AKR1B10O60218 316 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 GOLGA6DP0CG33 693 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 HAUS8Q9BT25 410 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 GOLGA6AQ9NYA3 693 aa10.52□□□□□ -0.73
PCDH19-203ENST00000420881 POLA1P09884 1462 aaPredicted RBP10.52□□□□□ -0.73
PCDH19-203ENST00000420881 BICD1Q96G01 975 aa10.51□□□□□ -0.73
PCDH19-203ENST00000420881 TPX2Q9ULW0 747 aaKnown RBP10.51□□□□□ -0.73
PCDH19-203ENST00000420881 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms