RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
TRIM39-206ENST00000420746 LGR6Q9HBX8 967 aa12.42□□□□□ -0.42
TRIM39-206ENST00000420746 KIF23Q02241 960 aaPredicted RBP12.41□□□□□ -0.42
TRIM39-206ENST00000420746 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
TRIM39-206ENST00000420746 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
TRIM39-206ENST00000420746 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
TRIM39-206ENST00000420746 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.42
TRIM39-206ENST00000420746 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
TRIM39-206ENST00000420746 HEG1Q9ULI3 1381 aa12.4□□□□□ -0.42
TRIM39-206ENST00000420746 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
TRIM39-206ENST00000420746 NOM1Q5C9Z4 860 aaKnown RBP12.39□□□□□ -0.43
TRIM39-206ENST00000420746 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
TRIM39-206ENST00000420746 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
TRIM39-206ENST00000420746 SLC10A3P09131 477 aa12.38□□□□□ -0.43
TRIM39-206ENST00000420746 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
TRIM39-206ENST00000420746 NPC1L1Q9UHC9 1359 aa12.38□□□□□ -0.43
TRIM39-206ENST00000420746 A0A0C4DFX4 3053 aa12.37□□□□□ -0.43
TRIM39-206ENST00000420746 C2orf69Q8N8R5 385 aa12.37□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
TRIM39-206ENST00000420746 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
TRIM39-206ENST00000420746 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
TRIM39-206ENST00000420746 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
TRIM39-206ENST00000420746 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-206ENST00000420746 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
TRIM39-206ENST00000420746 CXCL9Q07325 125 aa12.36□□□□□ -0.43
TRIM39-206ENST00000420746 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
TRIM39-206ENST00000420746 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
TRIM39-206ENST00000420746 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-206ENST00000420746 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
TRIM39-206ENST00000420746 ZNRF3Q9ULT6 936 aa12.35□□□□□ -0.43
TRIM39-206ENST00000420746 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
TRIM39-206ENST00000420746 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
TRIM39-206ENST00000420746 PPIP5K2O43314 1243 aa12.34□□□□□ -0.43
TRIM39-206ENST00000420746 INTS3Q68E01 1043 aaKnown RBP12.34□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
TRIM39-206ENST00000420746 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
TRIM39-206ENST00000420746 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
TRIM39-206ENST00000420746 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-206ENST00000420746 HTTP42858 3142 aa12.33□□□□□ -0.44
TRIM39-206ENST00000420746 A1BGP04217 495 aa12.33□□□□□ -0.44
TRIM39-206ENST00000420746 TRPM4Q8TD43 1214 aa12.33□□□□□ -0.44
TRIM39-206ENST00000420746 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM39-206ENST00000420746 IL13P35225 146 aa12.32□□□□□ -0.44
TRIM39-206ENST00000420746 TNIP1Q15025 636 aa12.32□□□□□ -0.44
TRIM39-206ENST00000420746 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
TRIM39-206ENST00000420746 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
TRIM39-206ENST00000420746 FMNL2Q96PY5 1086 aa12.32□□□□□ -0.44
TRIM39-206ENST00000420746 COLQQ9Y215 455 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-206ENST00000420746 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 H7C1D1 291 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 AOC3Q16853 763 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
TRIM39-206ENST00000420746 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 BCL2L13Q9BXK5 485 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-206ENST00000420746 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
TRIM39-206ENST00000420746 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-206ENST00000420746 GTF2E1P29083 439 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-206ENST00000420746 RASAL3Q86YV0 1011 aa12.3□□□□□ -0.44
TRIM39-206ENST00000420746 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
TRIM39-206ENST00000420746 CNOT7Q9UIV1 285 aaKnown RBP12.3□□□□□ -0.44
TRIM39-206ENST00000420746 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
TRIM39-206ENST00000420746 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-206ENST00000420746 GPR25O00155 361 aa12.29□□□□□ -0.44
TRIM39-206ENST00000420746 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
TRIM39-206ENST00000420746 DPF2Q92785 391 aa12.29□□□□□ -0.44
TRIM39-206ENST00000420746 TMX4Q9H1E5 349 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-206ENST00000420746 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
TRIM39-206ENST00000420746 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
TRIM39-206ENST00000420746 FKBP1BP68106 108 aa12.28□□□□□ -0.44
TRIM39-206ENST00000420746 TEFQ10587 303 aa12.28□□□□□ -0.44
TRIM39-206ENST00000420746 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
TRIM39-206ENST00000420746 DCPSQ96C86 337 aaKnown RBP12.28□□□□□ -0.44
TRIM39-206ENST00000420746 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
TRIM39-206ENST00000420746 COL6A3P12111 3177 aa12.27□□□□□ -0.44
TRIM39-206ENST00000420746 TBC1D8O95759 1140 aa12.27□□□□□ -0.45
TRIM39-206ENST00000420746 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
TRIM39-206ENST00000420746 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
TRIM39-206ENST00000420746 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
TRIM39-206ENST00000420746 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.45
TRIM39-206ENST00000420746 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 FKTNO75072 461 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 RAD17O75943 681 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 TM4SF4P48230 202 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 BRCA2P51587 3418 aa12.26□□□□□ -0.45
TRIM39-206ENST00000420746 CENPFP49454 3210 aa12.25□□□□□ -0.45
TRIM39-206ENST00000420746 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
TRIM39-206ENST00000420746 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-206ENST00000420746 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
TRIM39-206ENST00000420746 SHTN1A0MZ66 631 aa12.24□□□□□ -0.45
TRIM39-206ENST00000420746 RPS12P25398 132 aaKnown RBP12.24□□□□□ -0.45
TRIM39-206ENST00000420746 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
TRIM39-206ENST00000420746 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
TRIM39-206ENST00000420746 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
TRIM39-206ENST00000420746 PITPNM2Q9BZ72 1349 aa12.24□□□□□ -0.45
TRIM39-206ENST00000420746 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms