RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 SIL1Q9H173 461 aa20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 CPDO75976 1380 aa20.22■□□□□ 0.83
SEMA4F-204ENST00000420077 ESPNB1AK53 854 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 EPHA10Q5JZY3 1008 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 ANP32BQ92688 251 aaKnown RBP20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 SNRKQ9NRH2 765 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
SEMA4F-204ENST00000420077 NECTIN1Q15223 517 aa20.2■□□□□ 0.82
SEMA4F-204ENST00000420077 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.82
SEMA4F-204ENST00000420077 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
SEMA4F-204ENST00000420077 COL15A1P39059 1388 aa20.2■□□□□ 0.82
SEMA4F-204ENST00000420077 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 LRSAM1Q6UWE0 723 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 RBSNQ9H1K0 784 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 ZSWIM6Q9HCJ5 1215 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 CPA1P15085 419 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 ADCK5Q3MIX3 580 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 JAKMIP1Q96N16 626 aaKnown RBP20.19■□□□□ 0.82
SEMA4F-204ENST00000420077 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
SEMA4F-204ENST00000420077 COPRSQ9NQ92 184 aa20.18■□□□□ 0.82
SEMA4F-204ENST00000420077 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
SEMA4F-204ENST00000420077 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
SEMA4F-204ENST00000420077 SYCE3A1L190 88 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 BOLA2Q9H3K6 86 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 CYP46A1Q9Y6A2 500 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 MED23Q9ULK4 1368 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 LARGE1O95461 756 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 ZKSCAN1P17029 563 aaPredicted RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 RFX5P48382 616 aaPredicted RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 CABP4P57796 275 aa20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 RABL6Q3YEC7 729 aaPredicted RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
SEMA4F-204ENST00000420077 ZSCAN22P10073 491 aaPredicted RBP20.16■□□□□ 0.82
SEMA4F-204ENST00000420077 CREB3L3Q68CJ9 461 aa20.16■□□□□ 0.82
SEMA4F-204ENST00000420077 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
SEMA4F-204ENST00000420077 FSD1Q9BTV5 496 aa20.16■□□□□ 0.82
SEMA4F-204ENST00000420077 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
SEMA4F-204ENST00000420077 A0A0D9SFI3 127 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 STX6O43752 255 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 JCADQ9P266 1359 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 SYT1P21579 422 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
SEMA4F-204ENST00000420077 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
SEMA4F-204ENST00000420077 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
SEMA4F-204ENST00000420077 GDPD2Q9HCC8 539 aa20.14■□□□□ 0.81
SEMA4F-204ENST00000420077 KCNJ4P48050 445 aa20.14■□□□□ 0.81
SEMA4F-204ENST00000420077 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
SEMA4F-204ENST00000420077 SOS2Q07890 1332 aaPredicted RBP20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 SLC27A2O14975 620 aa20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 GADD45BO75293 160 aaPredicted RBP20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 CCDC83Q8IWF9 413 aa20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 JARID2Q92833 1246 aaPredicted RBP20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
SEMA4F-204ENST00000420077 CASP7P55210 303 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 TNNI3KQ59H18 835 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 DBNLQ9UJU6 430 aaKnown RBP20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 FPGT-TNNI3KV9GXZ4 949 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 TJP1Q07157 1748 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 F13A1P00488 732 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 ATP5JP18859 108 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 PDLIM2Q96JY6 352 aa20.12■□□□□ 0.81
SEMA4F-204ENST00000420077 A0A087WZG4 1122 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 PTCD1O75127 700 aaKnown RBP20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 PSMA5P28066 241 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 GJB2P29033 226 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 ST3GAL1Q11201 340 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 TFCP2Q12800 502 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 RNF20Q5VTR2 975 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 RFX7Q2KHR2 1363 aa20.11■□□□□ 0.81
SEMA4F-204ENST00000420077 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 ME3Q16798 604 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 WDR17Q8IZU2 1322 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 ZNF589Q86UQ0 364 aaPredicted RBP20.1■□□□□ 0.81
SEMA4F-204ENST00000420077 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms