RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ZNF280CQ8ND82 737 aa7.28□□□□□ -1.24
SEMA3A-202ENST00000420047 UBE2OQ9C0C9 1292 aaKnown RBP7.28□□□□□ -1.24
SEMA3A-202ENST00000420047 JPH1Q9HDC5 661 aaPredicted RBP7.28□□□□□ -1.24
SEMA3A-202ENST00000420047 SLC6A14Q9UN76 642 aa7.28□□□□□ -1.24
SEMA3A-202ENST00000420047 PALM3A6NDB9 673 aaPredicted RBP7.27□□□□□ -1.25
SEMA3A-202ENST00000420047 ILDR2Q71H61 639 aa7.27□□□□□ -1.25
SEMA3A-202ENST00000420047 BTLAQ7Z6A9 289 aa7.27□□□□□ -1.25
SEMA3A-202ENST00000420047 AFF1P51825 1210 aaKnown RBP7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 CLDN10P78369 228 aa7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 TP53INP1Q96A56 240 aa7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 SSBP4Q9BWG4 385 aaPredicted RBP7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 KIAA1024Q9UPX6 916 aa7.26□□□□□ -1.25
SEMA3A-202ENST00000420047 USP17L3A6NCW0 530 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 USP17L4A6NCW7 530 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 HYAL3O43820 417 aaPredicted RBP7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 TBC1D8BQ0IIM8 1120 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 PCSK7Q16549 785 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 USP17L2Q6R6M4 530 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 USP17L1Q7RTZ2 530 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 ALDH16A1Q8IZ83 802 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 FMR1NBQ8N0W7 255 aaPredicted RBP7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 SIX5Q8N196 739 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 GSX2Q9BZM3 304 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 IGFLR1Q9H665 355 aa7.25□□□□□ -1.25
SEMA3A-202ENST00000420047 IER5Q5VY09 327 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 PSAPL1Q6NUJ1 521 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 SHISA2Q6UWI4 295 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 OGFOD1Q8N543 542 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 NUDT8Q8WV74 236 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 KRTAP4-12Q9BQ66 201 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 C2orf49Q9BVC5 232 aaPredicted RBP7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 DNAJB12Q9NXW2 375 aaKnown RBP7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 USP21Q9UK80 565 aa7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 RBM19Q9Y4C8 960 aaKnown RBP7.24□□□□□ -1.25
SEMA3A-202ENST00000420047 C21orf2O43822 256 aa7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 ATP9BO43861 1147 aa7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 RGS9O75916 674 aaPredicted RBP7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 DMRTC2Q8IXT2 367 aaPredicted RBP7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 PNMA5Q96PV4 448 aa7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.23□□□□□ -1.25
SEMA3A-202ENST00000420047 ATAD2Q6PL18 1390 aa7.22□□□□□ -1.25
SEMA3A-202ENST00000420047 CCINQ13939 588 aa7.22□□□□□ -1.25
SEMA3A-202ENST00000420047 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
SEMA3A-202ENST00000420047 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
SEMA3A-202ENST00000420047 RAD21O60216 631 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 DKK1O94907 266 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 FBXO11Q86XK2 927 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 FRRS1LQ9P0K9 344 aa7.21□□□□□ -1.26
SEMA3A-202ENST00000420047 SLC24A1O60721 1099 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 RTN1Q16799 776 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 C11orf16Q9NQ32 467 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 NAGPAQ9UK23 515 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 RNF112Q9ULX5 631 aa7.2□□□□□ -1.26
SEMA3A-202ENST00000420047 TGFBR3LH3BV60 316 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 EPB42P16452 691 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 NFKB1P19838 968 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 HDGFL1Q5TGJ6 251 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 IGF2-ASQ6U949 168 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 SLC51AQ86UW1 340 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 FAM35AQ86V20 835 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 ADAMTS19Q8TE59 1207 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 TTC9Q92623 222 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 POM121Q96HA1 1249 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 UCN2Q96RP3 112 aa7.19□□□□□ -1.26
SEMA3A-202ENST00000420047 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
SEMA3A-202ENST00000420047 ZNF594Q96JF6 807 aaPredicted RBP7.18□□□□□ -1.26
SEMA3A-202ENST00000420047 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
SEMA3A-202ENST00000420047 POM121CA8CG34 1229 aa7.17□□□□□ -1.26
SEMA3A-202ENST00000420047 SEC13P55735 322 aa7.17□□□□□ -1.26
SEMA3A-202ENST00000420047 GRIK5Q16478 980 aa7.17□□□□□ -1.26
SEMA3A-202ENST00000420047 TRPM4Q8TD43 1214 aa7.17□□□□□ -1.26
SEMA3A-202ENST00000420047 NGLY1Q96IV0 654 aa7.17□□□□□ -1.26
SEMA3A-202ENST00000420047 IREB2P48200 963 aaKnown RBP7.16□□□□□ -1.26
SEMA3A-202ENST00000420047 WFDC8Q8IUA0 241 aa7.16□□□□□ -1.26
SEMA3A-202ENST00000420047 CHMP7Q8WUX9 453 aaPredicted RBP7.16□□□□□ -1.26
SEMA3A-202ENST00000420047 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
SEMA3A-202ENST00000420047 CPB1P15086 417 aa7.15□□□□□ -1.26
SEMA3A-202ENST00000420047 NOS3P29474 1203 aa7.15□□□□□ -1.26
SEMA3A-202ENST00000420047 INPP5BP32019 993 aa7.15□□□□□ -1.26
SEMA3A-202ENST00000420047 BCS1LQ9Y276 419 aa7.15□□□□□ -1.26
SEMA3A-202ENST00000420047 RASA1P20936 1047 aa7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 ARID4AP29374 1257 aaPredicted RBP7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 FLIIQ13045 1269 aa7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 PERM1Q5SV97 790 aa7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 ELMSAN1Q6PJG2 1045 aa7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 PRR23CQ6ZRP0 262 aa7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
SEMA3A-202ENST00000420047 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
SEMA3A-202ENST00000420047 IGFBP4P22692 258 aa7.13□□□□□ -1.27
SEMA3A-202ENST00000420047 GPLD1P80108 840 aa7.13□□□□□ -1.27
SEMA3A-202ENST00000420047 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms