RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 APBB1O00213 710 aa25.76■■□□□ 1.71
CASC3-203ENST00000418132 RAB11FIP3O75154 756 aa25.76■■□□□ 1.71
CASC3-203ENST00000418132 GPTP24298 496 aa25.76■■□□□ 1.71
CASC3-203ENST00000418132 ZBTB38Q8NAP3 1195 aaPredicted RBP25.76■■□□□ 1.71
CASC3-203ENST00000418132 LRRC4BQ9NT99 713 aa25.76■■□□□ 1.71
CASC3-203ENST00000418132 SLC27A3Q5K4L6 730 aa25.75■■□□□ 1.71
CASC3-203ENST00000418132 LRRCC1Q9C099 1032 aa25.75■■□□□ 1.71
CASC3-203ENST00000418132 RGL2O15211 777 aa25.75■■□□□ 1.71
CASC3-203ENST00000418132 SMARCA5O60264 1052 aaPredicted RBP25.75■■□□□ 1.71
CASC3-203ENST00000418132 FOXO4P98177 505 aa25.75■■□□□ 1.71
CASC3-203ENST00000418132 HSP90AB4PQ58FF6 505 aa25.75■■□□□ 1.71
CASC3-203ENST00000418132 GNPATO15228 680 aa25.73■■□□□ 1.71
CASC3-203ENST00000418132 RTL5Q5HYW3 569 aaPredicted RBP25.73■■□□□ 1.71
CASC3-203ENST00000418132 UBN2Q6ZU65 1347 aa25.73■■□□□ 1.71
CASC3-203ENST00000418132 CLEC4GQ6UXB4 293 aa25.73■■□□□ 1.71
CASC3-203ENST00000418132 BACH2Q9BYV9 841 aa25.73■■□□□ 1.71
CASC3-203ENST00000418132 SCN7AQ01118 1682 aa25.73■■□□□ 1.71
CASC3-203ENST00000418132 CDHR2Q9BYE9 1310 aa25.72■■□□□ 1.71
CASC3-203ENST00000418132 FAM161AQ3B820 660 aa25.72■■□□□ 1.71
CASC3-203ENST00000418132 ZNF652Q9Y2D9 606 aa25.72■■□□□ 1.71
CASC3-203ENST00000418132 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
CASC3-203ENST00000418132 FAM89AQ96GI7 184 aa25.71■■□□□ 1.71
CASC3-203ENST00000418132 PLA2G12BQ9BX93 195 aa25.71■■□□□ 1.71
CASC3-203ENST00000418132 LMBR1LQ6UX01 489 aa25.71■■□□□ 1.71
CASC3-203ENST00000418132 PLEKHM2Q8IWE5 1019 aa25.71■■□□□ 1.71
CASC3-203ENST00000418132 C16orf71Q8IYS4 520 aaPredicted RBP25.71■■□□□ 1.71
CASC3-203ENST00000418132 RFX5P48382 616 aaPredicted RBP25.7■■□□□ 1.7
CASC3-203ENST00000418132 KIF1BPQ96EK5 621 aa25.7■■□□□ 1.7
CASC3-203ENST00000418132 PA2G4Q9UQ80 394 aaKnown RBP25.7■■□□□ 1.7
CASC3-203ENST00000418132 C8orf34Q49A92 452 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 PARP10Q53GL7 1025 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 RHPN1Q8TCX5 695 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 NARFQ9UHQ1 456 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 PLSCR1O15162 318 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 COPRSQ9NQ92 184 aa25.69■■□□□ 1.7
CASC3-203ENST00000418132 TRMT112Q9UI30 125 aaKnown RBP25.69■■□□□ 1.7
CASC3-203ENST00000418132 HMGB2P26583 209 aaKnown RBP25.67■■□□□ 1.7
CASC3-203ENST00000418132 SMIM5Q71RC9 77 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 AMIGO3Q86WK7 504 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 OTUD7AQ8TE49 926 aaPredicted RBP25.67■■□□□ 1.7
CASC3-203ENST00000418132 AK7Q96M32 723 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 PTPN12Q05209 780 aaKnown RBP25.67■■□□□ 1.7
CASC3-203ENST00000418132 TXNRD1Q16881 649 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 ERC1Q8IUD2 1116 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 PROM2Q8N271 834 aa25.67■■□□□ 1.7
CASC3-203ENST00000418132 SALL3Q9BXA9 1300 aa25.66■■□□□ 1.7
CASC3-203ENST00000418132 SUSD4Q5VX71 490 aa25.66■■□□□ 1.7
CASC3-203ENST00000418132 NIP7Q9Y221 180 aaKnown RBP eCLIP25.66■■□□□ 1.7
CASC3-203ENST00000418132 C4AP0C0L4 1744 aa25.66■■□□□ 1.7
CASC3-203ENST00000418132 TNS1Q9HBL0 1735 aaKnown RBP25.66■■□□□ 1.7
CASC3-203ENST00000418132 OS9Q13438 667 aaPredicted RBP25.65■■□□□ 1.7
CASC3-203ENST00000418132 SYNE4Q8N205 404 aa25.65■■□□□ 1.7
CASC3-203ENST00000418132 ARHGEF1Q92888 912 aaKnown RBP25.65■■□□□ 1.7
CASC3-203ENST00000418132 UBR3Q6ZT12 1888 aa25.65■■□□□ 1.7
CASC3-203ENST00000418132 APBA3O96018 575 aa25.65■■□□□ 1.7
CASC3-203ENST00000418132 BMP2KLQ5H9B9 411 aa25.65■■□□□ 1.7
CASC3-203ENST00000418132 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
CASC3-203ENST00000418132 CSF1RP07333 972 aa25.64■■□□□ 1.7
CASC3-203ENST00000418132 ADRA2BP18089 450 aa25.64■■□□□ 1.7
CASC3-203ENST00000418132 G3BP1Q13283 466 aaKnown RBP eCLIP25.64■■□□□ 1.7
CASC3-203ENST00000418132 KLHDC4Q8TBB5 520 aa25.64■■□□□ 1.7
CASC3-203ENST00000418132 OSBPL3Q9H4L5 887 aa25.64■■□□□ 1.7
CASC3-203ENST00000418132 IL1RAPL2Q9NP60 686 aa25.64■■□□□ 1.7
CASC3-203ENST00000418132 IRS4O14654 1257 aaPredicted RBP25.64■■□□□ 1.69
CASC3-203ENST00000418132 USPL1Q5W0Q7 1092 aa25.64■■□□□ 1.69
CASC3-203ENST00000418132 UTP14AQ9BVJ6 771 aaKnown RBP25.64■■□□□ 1.69
CASC3-203ENST00000418132 BCL11AQ9H165 835 aa25.64■■□□□ 1.69
CASC3-203ENST00000418132 MYH3P11055 1940 aa25.63■■□□□ 1.69
CASC3-203ENST00000418132 MSH5O43196 834 aa25.63■■□□□ 1.69
CASC3-203ENST00000418132 ZPR1O75312 459 aa25.63■■□□□ 1.69
CASC3-203ENST00000418132 TRAPPC3LQ5T215 181 aa25.63■■□□□ 1.69
CASC3-203ENST00000418132 CHMP3Q9Y3E7 222 aa25.63■■□□□ 1.69
CASC3-203ENST00000418132 SH3TC1Q8TE82 1336 aa25.62■■□□□ 1.69
CASC3-203ENST00000418132 SRP68Q9UHB9 627 aaKnown RBP25.62■■□□□ 1.69
CASC3-203ENST00000418132 SASH1O94885 1247 aa25.62■■□□□ 1.69
CASC3-203ENST00000418132 NTSR2O95665 410 aa25.62■■□□□ 1.69
CASC3-203ENST00000418132 USP42Q9H9J4 1324 aaKnown RBP25.61■■□□□ 1.69
CASC3-203ENST00000418132 RGPD3A6NKT7 1758 aaPredicted RBP25.61■■□□□ 1.69
CASC3-203ENST00000418132 RGPD4Q7Z3J3 1758 aa25.61■■□□□ 1.69
CASC3-203ENST00000418132 PDE1AP54750 535 aa25.61■■□□□ 1.69
CASC3-203ENST00000418132 SIL1Q9H173 461 aa25.61■■□□□ 1.69
CASC3-203ENST00000418132 PDE8AO60658 829 aa25.6■■□□□ 1.69
CASC3-203ENST00000418132 CTSWP56202 376 aa25.6■■□□□ 1.69
CASC3-203ENST00000418132 TTC22Q5TAA0 569 aa25.6■■□□□ 1.69
CASC3-203ENST00000418132 TTLL11Q8NHH1 800 aa25.6■■□□□ 1.69
CASC3-203ENST00000418132 STAP2Q9UGK3 403 aa25.6■■□□□ 1.69
CASC3-203ENST00000418132 PHF14O94880 888 aa25.59■■□□□ 1.69
CASC3-203ENST00000418132 MX1P20591 662 aa25.59■■□□□ 1.69
CASC3-203ENST00000418132 RFC4P35249 363 aa25.59■■□□□ 1.69
CASC3-203ENST00000418132 TBC1D9BQ66K14 1250 aa25.59■■□□□ 1.69
CASC3-203ENST00000418132 LAMB2P55268 1798 aa25.59■■□□□ 1.69
CASC3-203ENST00000418132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.58■■□□□ 1.69
CASC3-203ENST00000418132 CLASRPQ8N2M8 674 aaKnown RBP25.58■■□□□ 1.69
CASC3-203ENST00000418132 COL24A1Q17RW2 1714 aa25.58■■□□□ 1.69
CASC3-203ENST00000418132 GSPT1P15170 499 aaKnown RBP25.58■■□□□ 1.69
CASC3-203ENST00000418132 SSFA2P28290 1259 aa25.58■■□□□ 1.69
CASC3-203ENST00000418132 DDX60Q8IY21 1712 aaKnown RBP25.58■■□□□ 1.68
CASC3-203ENST00000418132 FAM177BA6PVY3 158 aa25.57■■□□□ 1.68
CASC3-203ENST00000418132 CCDC57Q2TAC2 916 aa25.57■■□□□ 1.68
CASC3-203ENST00000418132 HSP90B1P14625 803 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms