RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
SMIM12-201ENST00000417239 PANK3Q9H999 370 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 RGL2O15211 777 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 TEFQ10587 303 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 IL17REQ8NFR9 667 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
SMIM12-201ENST00000417239 NIP7Q9Y221 180 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMIM12-201ENST00000417239 HTTP42858 3142 aa11.87□□□□□ -0.51
SMIM12-201ENST00000417239 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
SMIM12-201ENST00000417239 SAGE1Q9NXZ1 904 aa11.87□□□□□ -0.51
SMIM12-201ENST00000417239 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
SMIM12-201ENST00000417239 CENPFP49454 3210 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
SMIM12-201ENST00000417239 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 COL3A1P02461 1466 aaPredicted RBP11.86□□□□□ -0.51
SMIM12-201ENST00000417239 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
SMIM12-201ENST00000417239 PRAMEF22A3QJZ6 481 aa11.85□□□□□ -0.51
SMIM12-201ENST00000417239 KCNQ3O43525 872 aa11.85□□□□□ -0.51
SMIM12-201ENST00000417239 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
SMIM12-201ENST00000417239 GRIPAP1Q4V328 841 aa11.85□□□□□ -0.51
SMIM12-201ENST00000417239 KIF7Q2M1P5 1343 aa11.85□□□□□ -0.51
SMIM12-201ENST00000417239 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
SMIM12-201ENST00000417239 RBBP6Q7Z6E9 1792 aaKnown RBP11.84□□□□□ -0.51
SMIM12-201ENST00000417239 BRCA2P51587 3418 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 DDX60Q8IY21 1712 aaKnown RBP11.84□□□□□ -0.51
SMIM12-201ENST00000417239 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
SMIM12-201ENST00000417239 HUNKP57058 714 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
SMIM12-201ENST00000417239 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
SMIM12-201ENST00000417239 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
SMIM12-201ENST00000417239 TAF1P21675 1872 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 GMPSP49915 693 aaPredicted RBP11.83□□□□□ -0.52
SMIM12-201ENST00000417239 CXCL9Q07325 125 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 HLFQ16534 295 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 AOC3Q16853 763 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
SMIM12-201ENST00000417239 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
SMIM12-201ENST00000417239 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
SMIM12-201ENST00000417239 GTF2E1P29083 439 aaPredicted RBP11.82□□□□□ -0.52
SMIM12-201ENST00000417239 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
SMIM12-201ENST00000417239 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
SMIM12-201ENST00000417239 RNF186Q9NXI6 227 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 ZNRF3Q9ULT6 936 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 DUOX1Q9NRD9 1551 aa11.82□□□□□ -0.52
SMIM12-201ENST00000417239 DIAPH1O60610 1272 aaKnown RBP11.81□□□□□ -0.52
SMIM12-201ENST00000417239 TRPA1O75762 1119 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
SMIM12-201ENST00000417239 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 VPS33BQ9H267 617 aa11.81□□□□□ -0.52
SMIM12-201ENST00000417239 SZT2Q5T011 3432 aa11.8□□□□□ -0.52
SMIM12-201ENST00000417239 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
SMIM12-201ENST00000417239 PAPPA2Q9BXP8 1791 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
SMIM12-201ENST00000417239 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
SMIM12-201ENST00000417239 HABP4Q5JVS0 413 aaKnown RBP11.79□□□□□ -0.52
SMIM12-201ENST00000417239 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 RTFDC1Q9BY42 306 aaPredicted RBP11.79□□□□□ -0.52
SMIM12-201ENST00000417239 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 DLG5Q8TDM6 1919 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
SMIM12-201ENST00000417239 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
SMIM12-201ENST00000417239 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SMIM12-201ENST00000417239 GBA2Q9HCG7 927 aaPredicted RBP11.78□□□□□ -0.52
SMIM12-201ENST00000417239 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
SMIM12-201ENST00000417239 PSME4Q14997 1843 aa11.78□□□□□ -0.52
SMIM12-201ENST00000417239 RAD17O75943 681 aa11.77□□□□□ -0.53
SMIM12-201ENST00000417239 SLC10A3P09131 477 aa11.77□□□□□ -0.53
SMIM12-201ENST00000417239 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
SMIM12-201ENST00000417239 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
SMIM12-201ENST00000417239 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
SMIM12-201ENST00000417239 CNOT7Q9UIV1 285 aaKnown RBP11.77□□□□□ -0.53
SMIM12-201ENST00000417239 SCN9AQ15858 1988 aa11.77□□□□□ -0.53
SMIM12-201ENST00000417239 ERVV-1B6SEH8 477 aa11.76□□□□□ -0.53
SMIM12-201ENST00000417239 KIAA2012Q0VF49 1180 aa11.76□□□□□ -0.53
SMIM12-201ENST00000417239 TNIP1Q15025 636 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms