RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SIX5Q8N196 739 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 MYRIPQ8NFW9 859 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 ENOX1Q8TC92 643 aaKnown RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 TRPM4Q8TD43 1214 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 HELQQ8TDG4 1101 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 EPS8L1Q8TE68 723 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 RBM33Q96EV2 1170 aaKnown RBP3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 NEUROD4Q9HD90 331 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 SNTG2Q9NY99 539 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 CEP126Q9P2H0 1117 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 GGT7Q9UJ14 662 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 PDZRN3Q9UPQ7 1066 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 ATP8A1Q9Y2Q0 1164 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 RABGAP1Q9Y3P9 1069 aa3.89□□□□□ -1.79
CTDSPL-203ENST00000416688 GOLGA6CA6NDK9 693 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 GOLGA6BA6NDN3 693 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 GOLGA6DP0CG33 693 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 NPR3P17342 541 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 PPM1FP49593 454 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 IFRD2Q12894 506 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 PAK2Q13177 524 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 MTMR3Q13615 1198 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 RAB33AQ14088 237 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 TTF1Q15361 905 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 CDC37Q16543 378 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 DOK7Q18PE1 504 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 ALFQ53S48 1182 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 INO80DQ53TQ3 878 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 C10orf62Q5T681 223 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 ERICH6BQ5W0A0 696 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 ALKBH2Q6NS38 261 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 CC2D1AQ6P1N0 951 aaPredicted RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 ARMCX6Q7L4S7 300 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 SPNS2Q8IVW8 549 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 CPXCR1Q8N123 301 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 MYO1HQ8N1T3 1032 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 PGBD3Q8N328 593 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 PLPP7Q8NBV4 271 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM174AQ8TBP5 190 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 COL26A1Q96A83 441 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 SLC39A13Q96H72 371 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 TTC14Q96N46 770 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 AS3MTQ9HBK9 375 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 SRA1Q9HD15 236 aaKnown RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 GOLGA6AQ9NYA3 693 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 SEPT3Q9UH03 358 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 KLF15Q9UIH9 416 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 MCM8Q9UJA3 840 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 CDV3Q9UKY7 258 aaKnown RBP3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 INTUQ9ULD6 942 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 AKAP2Q9Y2D5 859 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 CHMP3Q9Y3E7 222 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 AK5Q9Y6K8 562 aa3.88□□□□□ -1.79
CTDSPL-203ENST00000416688 RCCD1A6NED2 376 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 A6NJY4 79 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 HIP1RO75146 1068 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 IFIT2P09913 472 aaKnown RBP3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM163BP0C2L3 166 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 FBXO45P0C2W1 286 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 PRSS12P56730 875 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 GJC2Q5T442 439 aaPredicted RBP3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ACBD5Q5T8D3 534 aaPredicted RBP3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 TYW1BQ6NUM6 668 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 SLC4A10Q6U841 1118 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 KSR2Q6VAB6 950 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ANKS3Q6ZW76 656 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 SYNPOQ8N3V7 929 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 RASGRP4Q8TDF6 673 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 FBF1Q8TES7 1133 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 E2F7Q96AV8 911 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ALKBH8Q96BT7 664 aaKnown RBP3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 HINFPQ9BQA5 517 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 MKNK1Q9BUB5 465 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ZNF408Q9H9D4 720 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 PPCSQ9HAB8 311 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ZSWIM6Q9HCJ5 1215 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 TMEM260Q9NX78 707 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 POLG2Q9UHN1 485 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ASAP1Q9ULH1 1129 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 STRIP2Q9ULQ0 834 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 GTF2A1LQ9UNN4 478 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 PLAAQ9Y263 795 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 MRPS23Q9Y3D9 190 aaKnown RBP3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 PPP2R3BQ9Y5P8 575 aa3.87□□□□□ -1.79
CTDSPL-203ENST00000416688 ESYT3A0FGR9 886 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 SLC26A4O43511 780 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 RNASEH2AO75792 299 aaKnown RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM200BP0CF97 657 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CLDN10P78369 228 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM160A1Q05DH4 1040 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 MMRN1Q13201 1228 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 RASA3Q14644 834 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 TCEA2Q15560 299 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC92Q53HC0 331 aaPredicted RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CT47A1Q5JQC4 288 aaPredicted RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 RNF20Q5VTR2 975 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 KRT77Q7Z794 578 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 ZSCAN30Q86W11 494 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 RDH13Q8NBN7 331 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms