RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 NEFLP07196 543 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 ADRA2BP18089 450 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 RFC4P35249 363 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 HLFQ16534 295 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
TRAPPC12-204ENST00000415624 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
TRAPPC12-204ENST00000415624 ZPR1O75312 459 aa13.86□□□□□ -0.19
TRAPPC12-204ENST00000415624 GPTP24298 496 aa13.86□□□□□ -0.19
TRAPPC12-204ENST00000415624 CRBNQ96SW2 442 aa13.86□□□□□ -0.19
TRAPPC12-204ENST00000415624 MYH3P11055 1940 aa13.86□□□□□ -0.19
TRAPPC12-204ENST00000415624 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 HSPA1AP0DMV8 641 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 HSPA1BP0DMV9 641 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 MS4A1P11836 297 aa13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 CWF19L2Q2TBE0 894 aaKnown RBP13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 METTL22Q9BUU2 404 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 NARFQ9UHQ1 456 aa13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 ZNF652Q9Y2D9 606 aa13.85□□□□□ -0.19
TRAPPC12-204ENST00000415624 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
TRAPPC12-204ENST00000415624 GIGYF2Q6Y7W6 1299 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-204ENST00000415624 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
TRAPPC12-204ENST00000415624 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
TRAPPC12-204ENST00000415624 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
TRAPPC12-204ENST00000415624 TNRC6CQ9HCJ0 1690 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 CCT4P50991 539 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 BEND3Q5T5X7 828 aa13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 UBN2Q6ZU65 1347 aa13.83□□□□□ -0.2
TRAPPC12-204ENST00000415624 FAM177BA6PVY3 158 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 NEURL1BA8MQ27 555 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 FSTL1Q12841 308 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 FKBP8Q14318 412 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 INTS3Q68E01 1043 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAPPC12-204ENST00000415624 NRXN2Q9P2S2 1712 aa13.81□□□□□ -0.2
TRAPPC12-204ENST00000415624 GYS1P13807 737 aa13.81□□□□□ -0.2
TRAPPC12-204ENST00000415624 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
TRAPPC12-204ENST00000415624 MEIS3Q99687 375 aa13.81□□□□□ -0.2
TRAPPC12-204ENST00000415624 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 RTL5Q5HYW3 569 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 JARID2Q92833 1246 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
TRAPPC12-204ENST00000415624 NLRP10Q86W26 655 aa13.79□□□□□ -0.2
TRAPPC12-204ENST00000415624 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
TRAPPC12-204ENST00000415624 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
TRAPPC12-204ENST00000415624 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
TRAPPC12-204ENST00000415624 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 GCKRQ14397 625 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 NFIXQ14938 502 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 CLEC4GQ6UXB4 293 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 ABCC12Q96J65 1359 aa13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC12-204ENST00000415624 GRM8O00222 908 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 NPHP1O15259 732 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 PARP10Q53GL7 1025 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 SUSD4Q5VX71 490 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 SETDB2Q96T68 719 aa13.77□□□□□ -0.21
TRAPPC12-204ENST00000415624 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 RGL2O15211 777 aa13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 NTSR2O95665 410 aa13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 DDR1Q08345 913 aa13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
TRAPPC12-204ENST00000415624 MMP10P09238 476 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
TRAPPC12-204ENST00000415624 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
TRAPPC12-204ENST00000415624 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
TRAPPC12-204ENST00000415624 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC12-204ENST00000415624 GNAI3P08754 354 aa13.74□□□□□ -0.21
TRAPPC12-204ENST00000415624 TRIM28Q13263 835 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms