RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 NEURL1BA8MQ27 555 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
PRKD1-202ENST00000415220 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 F13A1P00488 732 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 MSNP26038 577 aaKnown RBP17.61■□□□□ 0.41
PRKD1-202ENST00000415220 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.41
PRKD1-202ENST00000415220 CREB3L3Q68CJ9 461 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 SLC52A2Q9HAB3 445 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
PRKD1-202ENST00000415220 ERC1Q8IUD2 1116 aa17.6■□□□□ 0.41
PRKD1-202ENST00000415220 RUFY2Q8WXA3 655 aa17.6■□□□□ 0.41
PRKD1-202ENST00000415220 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
PRKD1-202ENST00000415220 GPATCH3Q96I76 525 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 DNM1Q05193 864 aaKnown RBP17.59■□□□□ 0.41
PRKD1-202ENST00000415220 KCNB2Q92953 911 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 NOL7Q9UMY1 257 aaKnown RBP17.59■□□□□ 0.41
PRKD1-202ENST00000415220 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 PHKG2P15735 406 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 GCKRQ14397 625 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
PRKD1-202ENST00000415220 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
PRKD1-202ENST00000415220 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 TMEM87AQ8NBN3 555 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
PRKD1-202ENST00000415220 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 SLC27A2O14975 620 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 FSD1Q9BTV5 496 aa17.58■□□□□ 0.4
PRKD1-202ENST00000415220 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 COL15A1P39059 1388 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 ATP5J2-PTCD1G3V325 749 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 PTCD1O75127 700 aaKnown RBP17.57■□□□□ 0.4
PRKD1-202ENST00000415220 KCNJ4P48050 445 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 ALS2Q96Q42 1657 aa17.57■□□□□ 0.4
PRKD1-202ENST00000415220 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
PRKD1-202ENST00000415220 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
PRKD1-202ENST00000415220 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
PRKD1-202ENST00000415220 CYP27B1O15528 508 aa17.55■□□□□ 0.4
PRKD1-202ENST00000415220 OFD1O75665 1012 aa17.55■□□□□ 0.4
PRKD1-202ENST00000415220 SYAP1Q96A49 352 aaPredicted RBP17.55■□□□□ 0.4
PRKD1-202ENST00000415220 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
PRKD1-202ENST00000415220 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
PRKD1-202ENST00000415220 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
PRKD1-202ENST00000415220 TFCP2Q12800 502 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
PRKD1-202ENST00000415220 HS1BP3Q53T59 392 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 CCDC129Q6ZRS4 1044 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 ZKSCAN5Q9Y2L8 839 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 AFDNP55196 1824 aaKnown RBP17.54■□□□□ 0.4
PRKD1-202ENST00000415220 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 CDC37L1Q7L3B6 337 aa17.54■□□□□ 0.4
PRKD1-202ENST00000415220 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
PRKD1-202ENST00000415220 STK3Q13188 491 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 CCDC183Q5T5S1 534 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 GIMAP6Q6P9H5 292 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 ANKRD13DQ6ZTN6 518 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 ZKSCAN1P17029 563 aaPredicted RBP17.53■□□□□ 0.4
PRKD1-202ENST00000415220 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
PRKD1-202ENST00000415220 UBE2HP62256 183 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
PRKD1-202ENST00000415220 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 MRC1P22897 1456 aa17.53■□□□□ 0.4
PRKD1-202ENST00000415220 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
PRKD1-202ENST00000415220 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
PRKD1-202ENST00000415220 ZNF830Q96NB3 372 aaPredicted RBP17.52■□□□□ 0.4
PRKD1-202ENST00000415220 COL18A1P39060 1754 aa17.52■□□□□ 0.39
PRKD1-202ENST00000415220 SNRKQ9NRH2 765 aa17.52■□□□□ 0.39
PRKD1-202ENST00000415220 ZNF500O60304 480 aaPredicted RBP17.51■□□□□ 0.39
PRKD1-202ENST00000415220 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
PRKD1-202ENST00000415220 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
PRKD1-202ENST00000415220 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
PRKD1-202ENST00000415220 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
PRKD1-202ENST00000415220 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
PRKD1-202ENST00000415220 TAF5LO75529 589 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
PRKD1-202ENST00000415220 HDAC5Q9UQL6 1122 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
PRKD1-202ENST00000415220 C19orf44Q9H6X5 657 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRKD1-202ENST00000415220 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 GLI3P10071 1580 aa17.5■□□□□ 0.39
PRKD1-202ENST00000415220 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms