RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 SIL1Q9H173 461 aa23.39■■□□□ 1.33
PPM1N-206ENST00000415077 ATRNO75882 1429 aa23.39■■□□□ 1.33
PPM1N-206ENST00000415077 EIF5P55010 431 aaKnown RBP23.38■■□□□ 1.33
PPM1N-206ENST00000415077 C22orf23Q9BZE7 217 aa23.38■■□□□ 1.33
PPM1N-206ENST00000415077 TBC1D2BQ9UPU7 963 aa23.38■■□□□ 1.33
PPM1N-206ENST00000415077 AOX1Q06278 1338 aa23.38■■□□□ 1.33
PPM1N-206ENST00000415077 ERVV-1B6SEH8 477 aa23.38■■□□□ 1.33
PPM1N-206ENST00000415077 ONECUT3O60422 494 aaPredicted RBP23.38■■□□□ 1.33
PPM1N-206ENST00000415077 COPRSQ9NQ92 184 aa23.38■■□□□ 1.33
PPM1N-206ENST00000415077 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
PPM1N-206ENST00000415077 CASC1Q6TDU7 716 aa23.37■■□□□ 1.33
PPM1N-206ENST00000415077 SASH1O94885 1247 aa23.36■■□□□ 1.33
PPM1N-206ENST00000415077 RFX5P48382 616 aaPredicted RBP23.36■■□□□ 1.33
PPM1N-206ENST00000415077 EIF5BO60841 1220 aaKnown RBP23.36■■□□□ 1.33
PPM1N-206ENST00000415077 PTPN12Q05209 780 aaKnown RBP23.36■■□□□ 1.33
PPM1N-206ENST00000415077 PTF1AQ7RTS3 328 aa23.36■■□□□ 1.33
PPM1N-206ENST00000415077 QTRT2Q9H974 415 aaKnown RBP23.36■■□□□ 1.33
PPM1N-206ENST00000415077 CHMP3Q9Y3E7 222 aa23.36■■□□□ 1.33
PPM1N-206ENST00000415077 ZBTB38Q8NAP3 1195 aaPredicted RBP23.35■■□□□ 1.33
PPM1N-206ENST00000415077 CICQ96RK0 1608 aaPredicted RBP23.35■■□□□ 1.33
PPM1N-206ENST00000415077 PCCAP05165 728 aaPredicted RBP23.34■■□□□ 1.33
PPM1N-206ENST00000415077 GPTP24298 496 aa23.34■■□□□ 1.33
PPM1N-206ENST00000415077 SEPT12Q8IYM1 358 aa23.34■■□□□ 1.33
PPM1N-206ENST00000415077 IFIT2P09913 472 aaKnown RBP23.34■■□□□ 1.33
PPM1N-206ENST00000415077 NLRP10Q86W26 655 aa23.34■■□□□ 1.33
PPM1N-206ENST00000415077 FAM89AQ96GI7 184 aa23.34■■□□□ 1.33
PPM1N-206ENST00000415077 TRIM6-TRIM34B2RNG4 842 aa23.33■■□□□ 1.33
PPM1N-206ENST00000415077 AACSQ86V21 672 aa23.32■■□□□ 1.32
PPM1N-206ENST00000415077 PI4K2BQ8TCG2 481 aa23.32■■□□□ 1.32
PPM1N-206ENST00000415077 RILPL2Q969X0 211 aa23.32■■□□□ 1.32
PPM1N-206ENST00000415077 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
PPM1N-206ENST00000415077 USP42Q9H9J4 1324 aaKnown RBP23.31■■□□□ 1.32
PPM1N-206ENST00000415077 ERICH6Q7L0X2 663 aa23.31■■□□□ 1.32
PPM1N-206ENST00000415077 GPATCH3Q96I76 525 aa23.31■■□□□ 1.32
PPM1N-206ENST00000415077 DAXXQ9UER7 740 aaPredicted RBP23.31■■□□□ 1.32
PPM1N-206ENST00000415077 MYH14Q7Z406 1995 aaKnown RBP23.31■■□□□ 1.32
PPM1N-206ENST00000415077 NUP98P52948 1817 aa23.31■■□□□ 1.32
PPM1N-206ENST00000415077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.31■■□□□ 1.32
PPM1N-206ENST00000415077 ZNF831Q5JPB2 1677 aa23.3■■□□□ 1.32
PPM1N-206ENST00000415077 RREB1Q92766 1687 aa23.3■■□□□ 1.32
PPM1N-206ENST00000415077 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
PPM1N-206ENST00000415077 EAF2Q96CJ1 260 aaPredicted RBP23.3■■□□□ 1.32
PPM1N-206ENST00000415077 ERC2O15083 957 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 RBM25P49756 843 aaKnown RBP23.29■■□□□ 1.32
PPM1N-206ENST00000415077 KCNQ4P56696 695 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 ECHDC1Q9NTX5 307 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 BTAF1O14981 1849 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 GLRX3O76003 335 aaKnown RBP23.29■■□□□ 1.32
PPM1N-206ENST00000415077 ZNF34Q8IZ26 560 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 PLA2G12BQ9BX93 195 aa23.29■■□□□ 1.32
PPM1N-206ENST00000415077 TRMT112Q9UI30 125 aaKnown RBP23.29■■□□□ 1.32
PPM1N-206ENST00000415077 COL5A3P25940 1745 aaPredicted RBP23.28■■□□□ 1.32
PPM1N-206ENST00000415077 CDHR2Q9BYE9 1310 aa23.27■■□□□ 1.32
PPM1N-206ENST00000415077 CAMTA2O94983 1202 aa23.27■■□□□ 1.32
PPM1N-206ENST00000415077 SYNE4Q8N205 404 aa23.27■■□□□ 1.32
PPM1N-206ENST00000415077 CCDC8Q9H0W5 538 aaPredicted RBP23.27■■□□□ 1.32
PPM1N-206ENST00000415077 TFCP2Q12800 502 aa23.26■■□□□ 1.31
PPM1N-206ENST00000415077 CCDC57Q2TAC2 916 aa23.26■■□□□ 1.31
PPM1N-206ENST00000415077 UBN2Q6ZU65 1347 aa23.26■■□□□ 1.31
PPM1N-206ENST00000415077 MAP4K4O95819 1239 aaPredicted RBP23.25■■□□□ 1.31
PPM1N-206ENST00000415077 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
PPM1N-206ENST00000415077 CNTROBQ8N137 903 aa23.25■■□□□ 1.31
PPM1N-206ENST00000415077 CNTNAP4Q9C0A0 1308 aa23.25■■□□□ 1.31
PPM1N-206ENST00000415077 IRS4O14654 1257 aaPredicted RBP23.24■■□□□ 1.31
PPM1N-206ENST00000415077 CSF1RP07333 972 aa23.24■■□□□ 1.31
PPM1N-206ENST00000415077 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
PPM1N-206ENST00000415077 REC8O95072 547 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 CHMLP26374 656 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 BECN1Q14457 450 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
PPM1N-206ENST00000415077 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
PPM1N-206ENST00000415077 IL15P40933 162 aaPredicted RBP23.23■■□□□ 1.31
PPM1N-206ENST00000415077 TNNI3KQ59H18 835 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 ATG9AQ7Z3C6 839 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 FPGT-TNNI3KV9GXZ4 949 aa23.23■■□□□ 1.31
PPM1N-206ENST00000415077 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
PPM1N-206ENST00000415077 EYA2O00167 538 aa23.22■■□□□ 1.31
PPM1N-206ENST00000415077 RC3H1Q5TC82 1133 aaKnown RBP23.22■■□□□ 1.31
PPM1N-206ENST00000415077 CCDC85AQ96PX6 553 aaPredicted RBP23.22■■□□□ 1.31
PPM1N-206ENST00000415077 ZNF652Q9Y2D9 606 aa23.22■■□□□ 1.31
PPM1N-206ENST00000415077 CIAO1O76071 339 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 IFIT5Q13325 482 aaKnown RBP23.21■■□□□ 1.31
PPM1N-206ENST00000415077 USP26Q9BXU7 913 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 CTSWP56202 376 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 PARP10Q53GL7 1025 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 SUSD4Q5VX71 490 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 TTLL11Q8NHH1 800 aa23.21■■□□□ 1.31
PPM1N-206ENST00000415077 BCL11BQ9C0K0 894 aaPredicted RBP23.21■■□□□ 1.31
PPM1N-206ENST00000415077 LRRC24Q50LG9 513 aa23.2■■□□□ 1.3
PPM1N-206ENST00000415077 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
PPM1N-206ENST00000415077 UTP14AQ9BVJ6 771 aaKnown RBP23.2■■□□□ 1.3
PPM1N-206ENST00000415077 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.3
PPM1N-206ENST00000415077 PDE8AO60658 829 aa23.2■■□□□ 1.3
PPM1N-206ENST00000415077 TAF7LQ5H9L4 462 aa23.2■■□□□ 1.3
PPM1N-206ENST00000415077 CLEC4GQ6UXB4 293 aa23.2■■□□□ 1.3
PPM1N-206ENST00000415077 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
PPM1N-206ENST00000415077 KRT27Q7Z3Y8 459 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms