RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FKBP8Q14318 412 aa16.78■□□□□ 0.28
CNN3-203ENST00000415017 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
CNN3-203ENST00000415017 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
CNN3-203ENST00000415017 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
CNN3-203ENST00000415017 GRM8O00222 908 aa16.77■□□□□ 0.28
CNN3-203ENST00000415017 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
CNN3-203ENST00000415017 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
CNN3-203ENST00000415017 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
CNN3-203ENST00000415017 NTSR2O95665 410 aa16.76■□□□□ 0.27
CNN3-203ENST00000415017 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
CNN3-203ENST00000415017 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
CNN3-203ENST00000415017 NFIXQ14938 502 aa16.76■□□□□ 0.27
CNN3-203ENST00000415017 ARXQ96QS3 562 aa16.76■□□□□ 0.27
CNN3-203ENST00000415017 MEIS3Q99687 375 aa16.76■□□□□ 0.27
CNN3-203ENST00000415017 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
CNN3-203ENST00000415017 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
CNN3-203ENST00000415017 NIP7Q9Y221 180 aaKnown RBP eCLIP16.76■□□□□ 0.27
CNN3-203ENST00000415017 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
CNN3-203ENST00000415017 CDHR2Q9BYE9 1310 aa16.75■□□□□ 0.27
CNN3-203ENST00000415017 GNAI3P08754 354 aa16.75■□□□□ 0.27
CNN3-203ENST00000415017 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
CNN3-203ENST00000415017 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
CNN3-203ENST00000415017 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
CNN3-203ENST00000415017 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
CNN3-203ENST00000415017 CARMIL3Q8ND23 1372 aa16.75■□□□□ 0.27
CNN3-203ENST00000415017 GPTP24298 496 aa16.74■□□□□ 0.27
CNN3-203ENST00000415017 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
CNN3-203ENST00000415017 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
CNN3-203ENST00000415017 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
CNN3-203ENST00000415017 DDR1Q08345 913 aa16.73■□□□□ 0.27
CNN3-203ENST00000415017 SLC10A5Q5PT55 438 aa16.73■□□□□ 0.27
CNN3-203ENST00000415017 SETDB2Q96T68 719 aa16.73■□□□□ 0.27
CNN3-203ENST00000415017 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
CNN3-203ENST00000415017 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
CNN3-203ENST00000415017 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
CNN3-203ENST00000415017 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
CNN3-203ENST00000415017 NEFLP07196 543 aa16.71■□□□□ 0.27
CNN3-203ENST00000415017 MTX1Q13505 466 aa16.71■□□□□ 0.27
CNN3-203ENST00000415017 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
CNN3-203ENST00000415017 TNRC6CQ9HCJ0 1690 aaKnown RBP16.7■□□□□ 0.26
CNN3-203ENST00000415017 GNAI2P04899 355 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 UBTFL1P0CB47 393 aaPredicted RBP16.7■□□□□ 0.26
CNN3-203ENST00000415017 FOXO4P98177 505 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 R3HDM1Q15032 1099 aaKnown RBP16.7■□□□□ 0.26
CNN3-203ENST00000415017 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
CNN3-203ENST00000415017 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
CNN3-203ENST00000415017 SERPINB2P05120 415 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 ANKRD44Q8N8A2 993 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
CNN3-203ENST00000415017 MSH5O43196 834 aa16.68■□□□□ 0.26
CNN3-203ENST00000415017 CSF1RP07333 972 aa16.68■□□□□ 0.26
CNN3-203ENST00000415017 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
CNN3-203ENST00000415017 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
CNN3-203ENST00000415017 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
CNN3-203ENST00000415017 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
CNN3-203ENST00000415017 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
CNN3-203ENST00000415017 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
CNN3-203ENST00000415017 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
CNN3-203ENST00000415017 MMP10P09238 476 aa16.67■□□□□ 0.26
CNN3-203ENST00000415017 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
CNN3-203ENST00000415017 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
CNN3-203ENST00000415017 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
CNN3-203ENST00000415017 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
CNN3-203ENST00000415017 RTL9Q8NET4 1388 aa16.66■□□□□ 0.26
CNN3-203ENST00000415017 IRS4O14654 1257 aaPredicted RBP16.66■□□□□ 0.26
CNN3-203ENST00000415017 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
CNN3-203ENST00000415017 NBPF5PQ86XG9 351 aaPredicted RBP16.66■□□□□ 0.26
CNN3-203ENST00000415017 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
CNN3-203ENST00000415017 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
CNN3-203ENST00000415017 DLEC1Q9Y238 1755 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 PDE8AO60658 829 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 POLA2Q14181 598 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
CNN3-203ENST00000415017 NUTM1Q86Y26 1132 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
CNN3-203ENST00000415017 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
CNN3-203ENST00000415017 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
CNN3-203ENST00000415017 MSL1Q68DK7 614 aa16.64■□□□□ 0.25
CNN3-203ENST00000415017 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
CNN3-203ENST00000415017 TTLL11Q8NHH1 800 aa16.64■□□□□ 0.25
CNN3-203ENST00000415017 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
CNN3-203ENST00000415017 C10orf71Q711Q0 1435 aa16.63■□□□□ 0.25
CNN3-203ENST00000415017 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
CNN3-203ENST00000415017 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
CNN3-203ENST00000415017 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
CNN3-203ENST00000415017 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
CNN3-203ENST00000415017 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
CNN3-203ENST00000415017 LRP5O75197 1615 aa16.63■□□□□ 0.25
CNN3-203ENST00000415017 TAF1P21675 1872 aa16.63■□□□□ 0.25
CNN3-203ENST00000415017 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms