RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ZC3H15Q8WU90 426 aaKnown RBP18.15■□□□□ 0.5
RAPGEF1-204ENST00000414781 GPRC5DQ9NZD1 345 aa18.15■□□□□ 0.5
RAPGEF1-204ENST00000414781 IL13P35225 146 aa18.14■□□□□ 0.49
RAPGEF1-204ENST00000414781 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
RAPGEF1-204ENST00000414781 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
RAPGEF1-204ENST00000414781 GLIS2Q9BZE0 524 aaPredicted RBP18.14■□□□□ 0.49
RAPGEF1-204ENST00000414781 PGAP2Q9UHJ9 254 aa18.14■□□□□ 0.49
RAPGEF1-204ENST00000414781 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
RAPGEF1-204ENST00000414781 ZNF408Q9H9D4 720 aa18.13■□□□□ 0.49
RAPGEF1-204ENST00000414781 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
RAPGEF1-204ENST00000414781 COL4A5P29400 1685 aa18.12■□□□□ 0.49
RAPGEF1-204ENST00000414781 HUNKP57058 714 aa18.12■□□□□ 0.49
RAPGEF1-204ENST00000414781 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
RAPGEF1-204ENST00000414781 CDC37L1Q7L3B6 337 aa18.12■□□□□ 0.49
RAPGEF1-204ENST00000414781 A1BGP04217 495 aa18.11■□□□□ 0.49
RAPGEF1-204ENST00000414781 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
RAPGEF1-204ENST00000414781 CCDC102AQ96A19 550 aa18.11■□□□□ 0.49
RAPGEF1-204ENST00000414781 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
RAPGEF1-204ENST00000414781 ZIC5Q96T25 663 aa18.11■□□□□ 0.49
RAPGEF1-204ENST00000414781 HPS5Q9UPZ3 1129 aa18.1■□□□□ 0.49
RAPGEF1-204ENST00000414781 TEFQ10587 303 aa18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 MTHFSDQ2M296 383 aaKnown RBP18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 RGMBQ6NW40 437 aa18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
RAPGEF1-204ENST00000414781 TRPA1O75762 1119 aa18.08■□□□□ 0.48
RAPGEF1-204ENST00000414781 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.48
RAPGEF1-204ENST00000414781 MORC1Q86VD1 984 aa18.08■□□□□ 0.48
RAPGEF1-204ENST00000414781 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
RAPGEF1-204ENST00000414781 FAM155AB1AL88 458 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF1-204ENST00000414781 KIF23Q02241 960 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF1-204ENST00000414781 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF1-204ENST00000414781 PANK3Q9H999 370 aa18.07■□□□□ 0.48
RAPGEF1-204ENST00000414781 PPIP5K2O43314 1243 aa18.06■□□□□ 0.48
RAPGEF1-204ENST00000414781 HOXA10P31260 410 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF1-204ENST00000414781 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF1-204ENST00000414781 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
RAPGEF1-204ENST00000414781 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
RAPGEF1-204ENST00000414781 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
RAPGEF1-204ENST00000414781 ZNRF3Q9ULT6 936 aa18.05■□□□□ 0.48
RAPGEF1-204ENST00000414781 CXCL9Q07325 125 aa18.04■□□□□ 0.48
RAPGEF1-204ENST00000414781 C2orf69Q8N8R5 385 aa18.04■□□□□ 0.48
RAPGEF1-204ENST00000414781 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
RAPGEF1-204ENST00000414781 HMOX1P09601 288 aa18.03■□□□□ 0.48
RAPGEF1-204ENST00000414781 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
RAPGEF1-204ENST00000414781 GBA2Q9HCG7 927 aaPredicted RBP18.03■□□□□ 0.48
RAPGEF1-204ENST00000414781 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
RAPGEF1-204ENST00000414781 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
RAPGEF1-204ENST00000414781 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
RAPGEF1-204ENST00000414781 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
RAPGEF1-204ENST00000414781 ZNF157P51786 506 aaPredicted RBP18.02■□□□□ 0.48
RAPGEF1-204ENST00000414781 TNIP1Q15025 636 aa18.02■□□□□ 0.48
RAPGEF1-204ENST00000414781 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.48
RAPGEF1-204ENST00000414781 HIRAP54198 1017 aaPredicted RBP18.01■□□□□ 0.47
RAPGEF1-204ENST00000414781 AOC3Q16853 763 aa18.01■□□□□ 0.47
RAPGEF1-204ENST00000414781 USP48Q86UV5 1035 aa18.01■□□□□ 0.47
RAPGEF1-204ENST00000414781 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
RAPGEF1-204ENST00000414781 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
RAPGEF1-204ENST00000414781 SLC10A3P09131 477 aa18■□□□□ 0.47
RAPGEF1-204ENST00000414781 TRPM4Q8TD43 1214 aa18■□□□□ 0.47
RAPGEF1-204ENST00000414781 RBM17Q96I25 401 aaKnown RBP18■□□□□ 0.47
RAPGEF1-204ENST00000414781 HDAC9Q9UKV0 1011 aa18■□□□□ 0.47
RAPGEF1-204ENST00000414781 ABCC12Q96J65 1359 aa18■□□□□ 0.47
RAPGEF1-204ENST00000414781 H7C1D1 291 aa17.99■□□□□ 0.47
RAPGEF1-204ENST00000414781 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
RAPGEF1-204ENST00000414781 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
RAPGEF1-204ENST00000414781 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
RAPGEF1-204ENST00000414781 CSRNP1Q96S65 589 aa17.99■□□□□ 0.47
RAPGEF1-204ENST00000414781 PER1O15534 1290 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF1-204ENST00000414781 KRT26Q7Z3Y9 468 aa17.98■□□□□ 0.47
RAPGEF1-204ENST00000414781 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
RAPGEF1-204ENST00000414781 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF1-204ENST00000414781 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
RAPGEF1-204ENST00000414781 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF1-204ENST00000414781 FBXO46Q6PJ61 603 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF1-204ENST00000414781 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF1-204ENST00000414781 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
RAPGEF1-204ENST00000414781 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
RAPGEF1-204ENST00000414781 ANP32CO43423 234 aa17.96■□□□□ 0.47
RAPGEF1-204ENST00000414781 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
RAPGEF1-204ENST00000414781 CEMIPQ8WUJ3 1361 aa17.95■□□□□ 0.46
RAPGEF1-204ENST00000414781 NOM1Q5C9Z4 860 aaKnown RBP17.95■□□□□ 0.46
RAPGEF1-204ENST00000414781 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
RAPGEF1-204ENST00000414781 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 MICALL2Q8IY33 904 aa17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 DPF2Q92785 391 aa17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 AKAP11Q9UKA4 1901 aa17.94■□□□□ 0.46
RAPGEF1-204ENST00000414781 DIAPH1O60610 1272 aaKnown RBP17.93■□□□□ 0.46
RAPGEF1-204ENST00000414781 RAD17O75943 681 aa17.93■□□□□ 0.46
RAPGEF1-204ENST00000414781 HLFQ16534 295 aa17.93■□□□□ 0.46
RAPGEF1-204ENST00000414781 ZNF296Q8WUU4 475 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF1-204ENST00000414781 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
RAPGEF1-204ENST00000414781 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
RAPGEF1-204ENST00000414781 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
RAPGEF1-204ENST00000414781 KCNQ3O43525 872 aa17.92■□□□□ 0.46
RAPGEF1-204ENST00000414781 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms