RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 NLRP10Q86W26 655 aa13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 CCDC191Q8NCU4 936 aa13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 ARXQ96QS3 562 aa13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
SMARCAL1-204ENST00000412913 COL11A2P13942 1736 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 GPTP24298 496 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 RFC4P35249 363 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 AAMPQ13685 434 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 STK32BQ9NY57 414 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 COL4A1P02462 1669 aa13.31□□□□□ -0.28
SMARCAL1-204ENST00000412913 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
SMARCAL1-204ENST00000412913 NTSR2O95665 410 aa13.3□□□□□ -0.28
SMARCAL1-204ENST00000412913 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
SMARCAL1-204ENST00000412913 H7C1W4 665 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 ZPR1O75312 459 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 GNAI3P08754 354 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 SUSD4Q5VX71 490 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 RIC1Q4ADV7 1423 aa13.29□□□□□ -0.28
SMARCAL1-204ENST00000412913 KIF13BQ9NQT8 1826 aa13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 PCCAP05165 728 aaPredicted RBP13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 UBE3BQ7Z3V4 1068 aa13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 FLAD1Q8NFF5 587 aa13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 CHMP4BQ9H444 224 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 CARMIL3Q8ND23 1372 aa13.28□□□□□ -0.28
SMARCAL1-204ENST00000412913 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.28
SMARCAL1-204ENST00000412913 GNAI2P04899 355 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 NFIXQ14938 502 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 SIRT2Q8IXJ6 389 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.29
SMARCAL1-204ENST00000412913 TM4SF1P30408 202 aa13.26□□□□□ -0.29
SMARCAL1-204ENST00000412913 DDR1Q08345 913 aa13.26□□□□□ -0.29
SMARCAL1-204ENST00000412913 MTX1Q13505 466 aa13.26□□□□□ -0.29
SMARCAL1-204ENST00000412913 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
SMARCAL1-204ENST00000412913 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
SMARCAL1-204ENST00000412913 TAF1P21675 1872 aa13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 FOXO4P98177 505 aa13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-204ENST00000412913 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 UTP14AQ9BVJ6 771 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 TRMT112Q9UI30 125 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
SMARCAL1-204ENST00000412913 CACNA1SQ13698 1873 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 IGHDP01880 384 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 POLA2Q14181 598 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
SMARCAL1-204ENST00000412913 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
SMARCAL1-204ENST00000412913 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
SMARCAL1-204ENST00000412913 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
SMARCAL1-204ENST00000412913 PRR5LQ6MZQ0 368 aa13.22□□□□□ -0.29
SMARCAL1-204ENST00000412913 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
SMARCAL1-204ENST00000412913 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 CTSWP56202 376 aa13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 NBPF5PQ86XG9 351 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 NYXQ9GZU5 481 aa13.21□□□□□ -0.29
SMARCAL1-204ENST00000412913 ARAP2Q8WZ64 1704 aa13.21□□□□□ -0.3
SMARCAL1-204ENST00000412913 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
SMARCAL1-204ENST00000412913 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 PDE8AO60658 829 aa13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 SERPINB2P05120 415 aa13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 CSF1RP07333 972 aa13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 MMP10P09238 476 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms