RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
PUDP-202ENST00000412827 SPON1Q9HCB6 807 aa18.95■□□□□ 0.62
PUDP-202ENST00000412827 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
PUDP-202ENST00000412827 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
PUDP-202ENST00000412827 NPHP1O15259 732 aa18.94■□□□□ 0.62
PUDP-202ENST00000412827 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
PUDP-202ENST00000412827 MYD88Q99836 296 aa18.94■□□□□ 0.62
PUDP-202ENST00000412827 NYXQ9GZU5 481 aa18.94■□□□□ 0.62
PUDP-202ENST00000412827 NUP98P52948 1817 aa18.94■□□□□ 0.62
PUDP-202ENST00000412827 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 MMP10P09238 476 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 NFIXQ14938 502 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 TBC1D9BQ66K14 1250 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 SLC4A10Q6U841 1118 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 PPP1R42Q7Z4L9 355 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 LINS1Q8NG48 757 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 COL24A1Q17RW2 1714 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 F6X3S4 739 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 IGHDP01880 384 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 GPTP24298 496 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 TRIM28Q13263 835 aaKnown RBP18.93■□□□□ 0.62
PUDP-202ENST00000412827 ZNF34Q8IZ26 560 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 CCDC191Q8NCU4 936 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
PUDP-202ENST00000412827 NBPF5PQ86XG9 351 aaPredicted RBP18.92■□□□□ 0.62
PUDP-202ENST00000412827 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
PUDP-202ENST00000412827 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
PUDP-202ENST00000412827 HSP90B1P14625 803 aaKnown RBP18.91■□□□□ 0.62
PUDP-202ENST00000412827 GTF2E1P29083 439 aaPredicted RBP18.91■□□□□ 0.62
PUDP-202ENST00000412827 CNBD1Q8NA66 436 aa18.91■□□□□ 0.62
PUDP-202ENST00000412827 ATF5Q9Y2D1 282 aaPredicted RBP18.91■□□□□ 0.62
PUDP-202ENST00000412827 TM4SF1P30408 202 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 ST5P78524 1137 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 BEND3Q5T5X7 828 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 TPTE2Q6XPS3 522 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 NLRP10Q86W26 655 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 SMC5Q8IY18 1101 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 GCC1Q96CN9 775 aa18.9■□□□□ 0.62
PUDP-202ENST00000412827 UTP14AQ9BVJ6 771 aaKnown RBP18.9■□□□□ 0.62
PUDP-202ENST00000412827 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 POLRMTO00411 1230 aaKnown RBP18.89■□□□□ 0.61
PUDP-202ENST00000412827 GNAI2P04899 355 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 SERPINB2P05120 415 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 DDR1Q08345 913 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
PUDP-202ENST00000412827 HMMRO75330 724 aa18.88■□□□□ 0.61
PUDP-202ENST00000412827 SH3TC1Q8TE82 1336 aa18.87■□□□□ 0.61
PUDP-202ENST00000412827 MEIS3Q99687 375 aa18.87■□□□□ 0.61
PUDP-202ENST00000412827 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
PUDP-202ENST00000412827 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
PUDP-202ENST00000412827 IGKV5-2P06315 115 aa18.86■□□□□ 0.61
PUDP-202ENST00000412827 CWF19L2Q2TBE0 894 aaKnown RBP18.86■□□□□ 0.61
PUDP-202ENST00000412827 USP44Q9H0E7 712 aa18.86■□□□□ 0.61
PUDP-202ENST00000412827 RIC1Q4ADV7 1423 aa18.86■□□□□ 0.61
PUDP-202ENST00000412827 LRP5O75197 1615 aa18.86■□□□□ 0.61
PUDP-202ENST00000412827 NRXN2Q9P2S2 1712 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 NTSR2O95665 410 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
PUDP-202ENST00000412827 PTGER2P43116 358 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 GCKRQ14397 625 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
PUDP-202ENST00000412827 C9orf78Q9NZ63 289 aaPredicted RBP18.85■□□□□ 0.61
PUDP-202ENST00000412827 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
PUDP-202ENST00000412827 C10orf71Q711Q0 1435 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 UTYO14607 1347 aa18.85■□□□□ 0.61
PUDP-202ENST00000412827 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
PUDP-202ENST00000412827 PRR5LQ6MZQ0 368 aa18.84■□□□□ 0.61
PUDP-202ENST00000412827 CEP85Q6P2H3 762 aa18.84■□□□□ 0.61
PUDP-202ENST00000412827 SGIP1Q9BQI5 828 aa18.84■□□□□ 0.61
PUDP-202ENST00000412827 GRM8O00222 908 aa18.83■□□□□ 0.61
PUDP-202ENST00000412827 PDZRN3Q9UPQ7 1066 aa18.83■□□□□ 0.61
PUDP-202ENST00000412827 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.6
PUDP-202ENST00000412827 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
PUDP-202ENST00000412827 UBE3BQ7Z3V4 1068 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 SIRT2Q8IXJ6 389 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 PDE6BP35913 854 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 ATP8B2P98198 1209 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 NUTM1Q86Y26 1132 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 CD2APQ9Y5K6 639 aa18.81■□□□□ 0.6
PUDP-202ENST00000412827 LAMB2P55268 1798 aa18.8■□□□□ 0.6
PUDP-202ENST00000412827 ABCC12Q96J65 1359 aa18.8■□□□□ 0.6
PUDP-202ENST00000412827 IRS4O14654 1257 aaPredicted RBP18.8■□□□□ 0.6
PUDP-202ENST00000412827 NUCB1Q02818 461 aa18.8■□□□□ 0.6
PUDP-202ENST00000412827 ERFEQ4G0M1 354 aa18.8■□□□□ 0.6
PUDP-202ENST00000412827 FAM89AQ96GI7 184 aa18.8■□□□□ 0.6
PUDP-202ENST00000412827 H7C1W4 665 aa18.79■□□□□ 0.6
PUDP-202ENST00000412827 MTX1Q13505 466 aa18.79■□□□□ 0.6
PUDP-202ENST00000412827 SLC10A5Q5PT55 438 aa18.79■□□□□ 0.6
PUDP-202ENST00000412827 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
PUDP-202ENST00000412827 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
PUDP-202ENST00000412827 PDE8AO60658 829 aa18.77■□□□□ 0.6
PUDP-202ENST00000412827 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
PUDP-202ENST00000412827 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms