RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 ERBB4Q15303 1308 aa13.81□□□□□ -0.2
TRAFD1-202ENST00000412615 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 PIP4K2AP48426 406 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 NMIQ13287 307 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 FSD1Q9BTV5 496 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
TRAFD1-202ENST00000412615 KCNJ4P48050 445 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 A0A087WZG4 1122 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 SMC3Q9UQE7 1217 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 RBM8AQ9Y5S9 174 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 WDR17Q8IZU2 1322 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
TRAFD1-202ENST00000412615 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 PSMA5P28066 241 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
TRAFD1-202ENST00000412615 CPA1P15085 419 aa13.77□□□□□ -0.2
TRAFD1-202ENST00000412615 ATP5JP18859 108 aa13.77□□□□□ -0.2
TRAFD1-202ENST00000412615 TNNI3KQ59H18 835 aa13.77□□□□□ -0.2
TRAFD1-202ENST00000412615 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.2
TRAFD1-202ENST00000412615 FPGT-TNNI3KV9GXZ4 949 aa13.77□□□□□ -0.2
TRAFD1-202ENST00000412615 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 CLCN1P35523 988 aa13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 HSPA2P54652 639 aa13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 TFCP2Q12800 502 aa13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 LARP6Q9BRS8 491 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-202ENST00000412615 STX6O43752 255 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 CASP7P55210 303 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 A0A0D9SFI3 127 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 SLC27A2O14975 620 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 SYT1P21579 422 aa13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 DBNLQ9UJU6 430 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-202ENST00000412615 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 ESPNB1AK53 854 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 H7C1W4 665 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 NKX1-1Q15270 411 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 RBSNQ9H1K0 784 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 MED23Q9ULK4 1368 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 SYCE3A1L190 88 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 CCDC83Q8IWF9 413 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
TRAFD1-202ENST00000412615 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 HMG20BQ9P0W2 317 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 LARGE1O95461 756 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 IL2RBP14784 551 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 ARFGEF2Q9Y6D5 1785 aa13.74□□□□□ -0.21
TRAFD1-202ENST00000412615 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 PHF14O94880 888 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 GJB2P29033 226 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 GLI3P10071 1580 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 F13A1P00488 732 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 FOXO4P98177 505 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 ME3Q16798 604 aa13.73□□□□□ -0.21
TRAFD1-202ENST00000412615 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms