RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-210ENST00000412342 RNF123Q5XPI4 1314 aa16.89■□□□□ 0.29
HDAC8-210ENST00000412342 CHD4Q14839 1912 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 ATP5J2-PTCD1G3V325 749 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
HDAC8-210ENST00000412342 GPR162Q16538 588 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
HDAC8-210ENST00000412342 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
HDAC8-210ENST00000412342 SRGNP10124 158 aa16.87■□□□□ 0.29
HDAC8-210ENST00000412342 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
HDAC8-210ENST00000412342 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
HDAC8-210ENST00000412342 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
HDAC8-210ENST00000412342 MYD88Q99836 296 aa16.87■□□□□ 0.29
HDAC8-210ENST00000412342 PIM2Q9P1W9 311 aa16.87■□□□□ 0.29
HDAC8-210ENST00000412342 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 H0YIN7 160 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 NPHP1O15259 732 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
HDAC8-210ENST00000412342 CRY2Q49AN0 593 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
HDAC8-210ENST00000412342 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
HDAC8-210ENST00000412342 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
HDAC8-210ENST00000412342 FKBP5Q13451 457 aaPredicted RBP16.85■□□□□ 0.29
HDAC8-210ENST00000412342 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
HDAC8-210ENST00000412342 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-210ENST00000412342 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
HDAC8-210ENST00000412342 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
HDAC8-210ENST00000412342 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
HDAC8-210ENST00000412342 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
HDAC8-210ENST00000412342 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
HDAC8-210ENST00000412342 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
HDAC8-210ENST00000412342 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
HDAC8-210ENST00000412342 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
HDAC8-210ENST00000412342 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
HDAC8-210ENST00000412342 MASTLQ96GX5 879 aa16.83■□□□□ 0.28
HDAC8-210ENST00000412342 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
HDAC8-210ENST00000412342 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
HDAC8-210ENST00000412342 F6X3S4 739 aa16.82■□□□□ 0.28
HDAC8-210ENST00000412342 NPR1P16066 1061 aa16.82■□□□□ 0.28
HDAC8-210ENST00000412342 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
HDAC8-210ENST00000412342 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
HDAC8-210ENST00000412342 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-210ENST00000412342 COL4A1P02462 1669 aa16.81■□□□□ 0.28
HDAC8-210ENST00000412342 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-210ENST00000412342 HOXA10P31260 410 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-210ENST00000412342 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-210ENST00000412342 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-210ENST00000412342 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-210ENST00000412342 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
HDAC8-210ENST00000412342 MYH3P11055 1940 aa16.8■□□□□ 0.28
HDAC8-210ENST00000412342 SBF1O95248 1867 aa16.8■□□□□ 0.28
HDAC8-210ENST00000412342 TAF1P21675 1872 aa16.8■□□□□ 0.28
HDAC8-210ENST00000412342 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
HDAC8-210ENST00000412342 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
HDAC8-210ENST00000412342 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
HDAC8-210ENST00000412342 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
HDAC8-210ENST00000412342 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 PTPRCP08575 1304 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
HDAC8-210ENST00000412342 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 NLRP3Q96P20 1036 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
HDAC8-210ENST00000412342 CDHR2Q9BYE9 1310 aa16.78■□□□□ 0.28
HDAC8-210ENST00000412342 GCKRQ14397 625 aa16.78■□□□□ 0.28
HDAC8-210ENST00000412342 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-210ENST00000412342 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
HDAC8-210ENST00000412342 H7C1W4 665 aa16.77■□□□□ 0.28
HDAC8-210ENST00000412342 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
HDAC8-210ENST00000412342 CASP7P55210 303 aa16.77■□□□□ 0.28
HDAC8-210ENST00000412342 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
HDAC8-210ENST00000412342 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
HDAC8-210ENST00000412342 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
HDAC8-210ENST00000412342 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
HDAC8-210ENST00000412342 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
HDAC8-210ENST00000412342 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
HDAC8-210ENST00000412342 ABCC4O15439 1325 aa16.75■□□□□ 0.27
HDAC8-210ENST00000412342 NFKBIEO00221 500 aa16.75■□□□□ 0.27
HDAC8-210ENST00000412342 C21orf2O43822 256 aa16.75■□□□□ 0.27
HDAC8-210ENST00000412342 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
HDAC8-210ENST00000412342 PRELPP51888 382 aa16.74■□□□□ 0.27
HDAC8-210ENST00000412342 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
HDAC8-210ENST00000412342 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
HDAC8-210ENST00000412342 DICER1Q9UPY3 1922 aaKnown RBP16.73■□□□□ 0.27
HDAC8-210ENST00000412342 PDE8AO60658 829 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 RASSF7Q02833 373 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-210ENST00000412342 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
HDAC8-210ENST00000412342 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
HDAC8-210ENST00000412342 BCAR3O75815 825 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms