RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CATIPQ7Z7H3 387 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 IQCDQ96DY2 449 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 JAKMIP1Q96N16 626 aaKnown RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 VAV2P52735 878 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 SEC62Q99442 399 aaKnown RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 TPD52P55327 224 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 HAUS8Q9BT25 410 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 CTAGE9A4FU28 777 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 STX6O43752 255 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 SPATS2Q86XZ4 545 aaKnown RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 SCLT1Q96NL6 688 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 PPP1R9BQ96SB3 815 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 KRT86O43790 486 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 UBE2HP62256 183 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 MRPS9P82933 396 aaKnown RBP8.43□□□□□ -1.06
PTPN3-203ENST00000412145 MAP3K12Q12852 859 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 SPAG5Q96R06 1193 aa8.43□□□□□ -1.06
PTPN3-203ENST00000412145 CLGNO14967 610 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 MTIF2P46199 727 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CEBPZQ03701 1054 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 AACSQ86V21 672 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 TMTC2Q8N394 836 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 TMEM87AQ8NBN3 555 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CNNM3Q8NE01 707 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 ANKRD50Q9ULJ7 1429 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 RAD50Q92878 1312 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 ARHGAP25P42331 645 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CEP120Q8N960 986 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SMC1BQ8NDV3 1235 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CWC25Q9NXE8 425 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 NESP48681 1621 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 GBP6Q6ZN66 633 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 BICDL2A1A5D9 508 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 NBPF7P0C2Y1 421 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 TTC31Q49AM3 519 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC40Q4G0X9 1142 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 FYB2Q5VWT5 728 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SPTY2D1Q68D10 685 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 TAOK1Q7L7X3 1001 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SRGAP1Q7Z6B7 1085 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 NAP1L4Q99733 375 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 JADE2Q9NQC1 790 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 LIMCH1Q9UPQ0 1083 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 TBCAO75347 108 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 IMPG2Q9BZV3 1241 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 FEZ2Q9UHY8 353 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SLC12A7Q9Y666 1083 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 NCAPD3P42695 1498 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 ATP2B2Q01814 1243 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 ATL3Q6DD88 541 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SAMD1Q6SPF0 538 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
PTPN3-203ENST00000412145 SUPT6HQ7KZ85 1726 aaKnown RBP8.42□□□□□ -1.06
PTPN3-203ENST00000412145 HECW1Q76N89 1606 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 DNAJC8O75937 253 aaPredicted RBP8.41□□□□□ -1.06
PTPN3-203ENST00000412145 ZBTB16Q05516 673 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 PRC1O43663 620 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 IFIT1P09914 478 aaKnown RBP8.41□□□□□ -1.06
PTPN3-203ENST00000412145 LIG1P18858 919 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 TNNC1P63316 161 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 TCP11L2Q8N4U5 519 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 TXNDC16Q9P2K2 825 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 FCHSD2O94868 740 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 TCHPQ9BT92 498 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 NSD2O96028 1365 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 STARD3NLO95772 234 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 SYCE3A1L190 88 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
PTPN3-203ENST00000412145 MYO1BO43795 1136 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 MGEA5O60502 916 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 GNAQP50148 359 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 RASSF2P50749 326 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 MTUS1Q9ULD2 1270 aa8.41□□□□□ -1.06
PTPN3-203ENST00000412145 LDHCP07864 332 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 PDE4BQ07343 736 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 AMOTQ4VCS5 1084 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 OTUD6BQ8N6M0 293 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 THEGQ9P2T0 379 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 GPATCH11Q8N954 259 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 NAPBQ9H115 298 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms