RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 DGKZQ13574 1117 aa9.53□□□□□ -0.88
HDAC9-205ENST00000411993 IER5Q5VY09 327 aa9.53□□□□□ -0.88
HDAC9-205ENST00000411993 CHSY3Q70JA7 882 aa9.53□□□□□ -0.88
HDAC9-205ENST00000411993 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-205ENST00000411993 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
HDAC9-205ENST00000411993 SIN3BO75182 1162 aa9.52□□□□□ -0.89
HDAC9-205ENST00000411993 ALAS2P22557 587 aa9.52□□□□□ -0.89
HDAC9-205ENST00000411993 FKBP5Q13451 457 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-205ENST00000411993 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-205ENST00000411993 ELOA3DA6NLF2 546 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-205ENST00000411993 PIK3R2O00459 728 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 EPB42P16452 691 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 ELOA3BQ3SY89 546 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 ELOA3Q8NG57 546 aa9.51□□□□□ -0.89
HDAC9-205ENST00000411993 BHMTQ93088 406 aa9.5□□□□□ -0.89
HDAC9-205ENST00000411993 MYO19Q96H55 970 aa9.5□□□□□ -0.89
HDAC9-205ENST00000411993 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
HDAC9-205ENST00000411993 GNB5O14775 395 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 DGKGP49619 791 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 IDH3AP50213 366 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 PNMA5Q96PV4 448 aa9.49□□□□□ -0.89
HDAC9-205ENST00000411993 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-205ENST00000411993 TBC1D8BQ0IIM8 1120 aa9.48□□□□□ -0.89
HDAC9-205ENST00000411993 OCLNQ16625 522 aa9.48□□□□□ -0.89
HDAC9-205ENST00000411993 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
HDAC9-205ENST00000411993 LOC100996750A0A140TA64 210 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 ARSDP51689 593 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 LINC00114Q6XXX2 140 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 MKNK1Q9BUB5 465 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
HDAC9-205ENST00000411993 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-205ENST00000411993 DMGDHQ9UI17 866 aaKnown RBP9.47□□□□□ -0.89
HDAC9-205ENST00000411993 ADH7P40394 386 aa9.46□□□□□ -0.9
HDAC9-205ENST00000411993 IFT43Q96FT9 208 aa9.46□□□□□ -0.9
HDAC9-205ENST00000411993 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
HDAC9-205ENST00000411993 MICAL2O94851 1124 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 INPP5BP32019 993 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 CCINQ13939 588 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 CLP1Q92989 425 aaKnown RBP9.45□□□□□ -0.9
HDAC9-205ENST00000411993 IGFLR1Q9H665 355 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 NOP53Q9NZM5 478 aaKnown RBP9.45□□□□□ -0.9
HDAC9-205ENST00000411993 LRFN2Q9ULH4 789 aa9.45□□□□□ -0.9
HDAC9-205ENST00000411993 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
HDAC9-205ENST00000411993 COX20Q5RI15 118 aa9.44□□□□□ -0.9
HDAC9-205ENST00000411993 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
HDAC9-205ENST00000411993 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
HDAC9-205ENST00000411993 MDFIQ99750 246 aa9.44□□□□□ -0.9
HDAC9-205ENST00000411993 GSX2Q9BZM3 304 aa9.44□□□□□ -0.9
HDAC9-205ENST00000411993 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
HDAC9-205ENST00000411993 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-205ENST00000411993 NFKB1P19838 968 aa9.43□□□□□ -0.9
HDAC9-205ENST00000411993 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
HDAC9-205ENST00000411993 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
HDAC9-205ENST00000411993 COL8A1P27658 744 aa9.42□□□□□ -0.9
HDAC9-205ENST00000411993 PLA2G4EQ3MJ16 856 aa9.42□□□□□ -0.9
HDAC9-205ENST00000411993 TREML1Q86YW5 311 aa9.42□□□□□ -0.9
HDAC9-205ENST00000411993 M0R082 166 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 IGHA1P01876 353 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 NAA30Q147X3 362 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-205ENST00000411993 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 ZNF417Q8TAU3 575 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 ZNF587Q96SQ5 575 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-205ENST00000411993 SAP130Q9H0E3 1048 aa9.41□□□□□ -0.9
HDAC9-205ENST00000411993 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-205ENST00000411993 BRD2P25440 801 aaKnown RBP9.4□□□□□ -0.9
HDAC9-205ENST00000411993 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
HDAC9-205ENST00000411993 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
HDAC9-205ENST00000411993 DNAJB12Q9NXW2 375 aaKnown RBP9.4□□□□□ -0.9
HDAC9-205ENST00000411993 SLC6A14Q9UN76 642 aa9.4□□□□□ -0.9
HDAC9-205ENST00000411993 ALBP02768 609 aa9.39□□□□□ -0.91
HDAC9-205ENST00000411993 CAPN12Q6ZSI9 719 aa9.39□□□□□ -0.91
HDAC9-205ENST00000411993 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
HDAC9-205ENST00000411993 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
HDAC9-205ENST00000411993 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
HDAC9-205ENST00000411993 STARD13Q9Y3M8 1113 aa9.39□□□□□ -0.91
HDAC9-205ENST00000411993 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 C11orf16Q9NQ32 467 aa9.38□□□□□ -0.91
HDAC9-205ENST00000411993 KRBA1A5PL33 1030 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 MSTNO14793 375 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 OPLAHO14841 1288 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 RARAP10276 462 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
HDAC9-205ENST00000411993 XYLBO75191 536 aa9.36□□□□□ -0.91
HDAC9-205ENST00000411993 SASH3O75995 380 aa9.36□□□□□ -0.91
HDAC9-205ENST00000411993 PCSK7Q16549 785 aa9.36□□□□□ -0.91
HDAC9-205ENST00000411993 C8orf86Q6ZUL3 223 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms