RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 NEURL1BA8MQ27 555 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 SURF6O75683 361 aaKnown RBP23.73■■□□□ 1.39
LMO2-203ENST00000411482 MX1P20591 662 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 NEXNQ0ZGT2 675 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 AIMP1Q12904 312 aaKnown RBP23.73■■□□□ 1.39
LMO2-203ENST00000411482 KIF1BPQ96EK5 621 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 KAZALD1Q96I82 304 aa23.73■■□□□ 1.39
LMO2-203ENST00000411482 C4BP0C0L5 1744 aa23.72■■□□□ 1.39
LMO2-203ENST00000411482 MYL6BP14649 208 aa23.72■■□□□ 1.39
LMO2-203ENST00000411482 RHPN1Q8TCX5 695 aa23.72■■□□□ 1.39
LMO2-203ENST00000411482 TBC1D2Q9BYX2 928 aa23.72■■□□□ 1.39
LMO2-203ENST00000411482 GCKRQ14397 625 aa23.71■■□□□ 1.39
LMO2-203ENST00000411482 PLBD2Q8NHP8 589 aa23.71■■□□□ 1.39
LMO2-203ENST00000411482 NBPF26B4DH59 902 aa23.7■■□□□ 1.38
LMO2-203ENST00000411482 NBPF10Q6P3W6 841 aaKnown RBP23.7■■□□□ 1.38
LMO2-203ENST00000411482 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
LMO2-203ENST00000411482 NBPF15Q8N660 670 aa23.7■■□□□ 1.38
LMO2-203ENST00000411482 STK32BQ9NY57 414 aa23.7■■□□□ 1.38
LMO2-203ENST00000411482 AMIGO3Q86WK7 504 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 DNAJC10Q8IXB1 793 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 SNX21Q969T3 373 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 KIF2CQ99661 725 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 PDGFDQ9GZP0 370 aaPredicted RBP23.69■■□□□ 1.38
LMO2-203ENST00000411482 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
LMO2-203ENST00000411482 UBR3Q6ZT12 1888 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 QSER1Q2KHR3 1735 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 SUCLG2Q96I99 432 aa23.69■■□□□ 1.38
LMO2-203ENST00000411482 CASC1Q6TDU7 716 aa23.67■■□□□ 1.38
LMO2-203ENST00000411482 CYP19A1P11511 503 aaPredicted RBP23.66■■□□□ 1.38
LMO2-203ENST00000411482 RC3H1Q5TC82 1133 aaKnown RBP23.66■■□□□ 1.38
LMO2-203ENST00000411482 ERC1Q8IUD2 1116 aa23.66■■□□□ 1.38
LMO2-203ENST00000411482 MYD88Q99836 296 aa23.66■■□□□ 1.38
LMO2-203ENST00000411482 USP26Q9BXU7 913 aa23.66■■□□□ 1.38
LMO2-203ENST00000411482 ARFGEF2Q9Y6D5 1785 aa23.66■■□□□ 1.38
LMO2-203ENST00000411482 HMGB2P26583 209 aaKnown RBP23.65■■□□□ 1.38
LMO2-203ENST00000411482 SMIM5Q71RC9 77 aa23.65■■□□□ 1.38
LMO2-203ENST00000411482 TEX13AQ9BXU3 409 aaPredicted RBP23.65■■□□□ 1.38
LMO2-203ENST00000411482 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
LMO2-203ENST00000411482 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.38
LMO2-203ENST00000411482 INTS5Q6P9B9 1019 aaKnown RBP23.64■■□□□ 1.38
LMO2-203ENST00000411482 BICC1Q9H694 974 aaKnown RBP23.64■■□□□ 1.38
LMO2-203ENST00000411482 CNTNAP4Q9C0A0 1308 aa23.64■■□□□ 1.37
LMO2-203ENST00000411482 ANTXR1Q9H6X2 564 aa23.64■■□□□ 1.37
LMO2-203ENST00000411482 TFCP2L1Q9NZI6 479 aa23.64■■□□□ 1.37
LMO2-203ENST00000411482 CRKLP46109 303 aaKnown RBP23.63■■□□□ 1.37
LMO2-203ENST00000411482 CASP7P55210 303 aa23.63■■□□□ 1.37
LMO2-203ENST00000411482 RABL6Q3YEC7 729 aaPredicted RBP23.63■■□□□ 1.37
LMO2-203ENST00000411482 IL1RAPL2Q9NP60 686 aa23.63■■□□□ 1.37
LMO2-203ENST00000411482 PI4K2BQ8TCG2 481 aa23.62■■□□□ 1.37
LMO2-203ENST00000411482 TTC41PQ6P2S7 1318 aa23.61■■□□□ 1.37
LMO2-203ENST00000411482 REC8O95072 547 aa23.61■■□□□ 1.37
LMO2-203ENST00000411482 COL23A1Q86Y22 540 aaPredicted RBP23.61■■□□□ 1.37
LMO2-203ENST00000411482 ERC2O15083 957 aa23.6■■□□□ 1.37
LMO2-203ENST00000411482 A1BGP04217 495 aa23.6■■□□□ 1.37
LMO2-203ENST00000411482 PIP4K2AP48426 406 aaPredicted RBP23.6■■□□□ 1.37
LMO2-203ENST00000411482 AK7Q96M32 723 aa23.6■■□□□ 1.37
LMO2-203ENST00000411482 H7C1W4 665 aa23.59■■□□□ 1.37
LMO2-203ENST00000411482 GNPATO15228 680 aa23.59■■□□□ 1.37
LMO2-203ENST00000411482 EPB41L2O43491 1005 aaKnown RBP23.59■■□□□ 1.37
LMO2-203ENST00000411482 RPS6KA4O75676 772 aa23.59■■□□□ 1.37
LMO2-203ENST00000411482 NUTM1Q86Y26 1132 aa23.59■■□□□ 1.37
LMO2-203ENST00000411482 CCDC87Q9NVE4 849 aa23.59■■□□□ 1.37
LMO2-203ENST00000411482 CHMLP26374 656 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 EPHA10Q5JZY3 1008 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 TSHZ3Q63HK5 1081 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 TTLL7Q6ZT98 887 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 CLASRPQ8N2M8 674 aaKnown RBP23.58■■□□□ 1.36
LMO2-203ENST00000411482 BCL11AQ9H165 835 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 COPRSQ9NQ92 184 aa23.58■■□□□ 1.36
LMO2-203ENST00000411482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.57■■□□□ 1.36
LMO2-203ENST00000411482 STARD3NLO95772 234 aa23.57■■□□□ 1.36
LMO2-203ENST00000411482 SSFA2P28290 1259 aa23.57■■□□□ 1.36
LMO2-203ENST00000411482 RFX5P48382 616 aaPredicted RBP23.57■■□□□ 1.36
LMO2-203ENST00000411482 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
LMO2-203ENST00000411482 ZBTB1Q9Y2K1 713 aa23.57■■□□□ 1.36
LMO2-203ENST00000411482 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
LMO2-203ENST00000411482 SASH1O94885 1247 aa23.56■■□□□ 1.36
LMO2-203ENST00000411482 HSCBQ8IWL3 235 aa23.56■■□□□ 1.36
LMO2-203ENST00000411482 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
LMO2-203ENST00000411482 TRIM28Q13263 835 aaKnown RBP23.55■■□□□ 1.36
LMO2-203ENST00000411482 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
LMO2-203ENST00000411482 OS9Q13438 667 aaPredicted RBP23.55■■□□□ 1.36
LMO2-203ENST00000411482 CCDC191Q8NCU4 936 aa23.55■■□□□ 1.36
LMO2-203ENST00000411482 IL17RAQ96F46 866 aa23.55■■□□□ 1.36
LMO2-203ENST00000411482 RTCBQ9Y3I0 505 aaKnown RBP23.55■■□□□ 1.36
LMO2-203ENST00000411482 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
LMO2-203ENST00000411482 A0A087WZG4 1122 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 GLRX3O76003 335 aaKnown RBP23.54■■□□□ 1.36
LMO2-203ENST00000411482 NBR1Q14596 966 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 RABEP1Q15276 862 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 FLAD1Q8NFF5 587 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 PHF14O94880 888 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 ARHGEF1Q92888 912 aaKnown RBP23.54■■□□□ 1.36
LMO2-203ENST00000411482 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
LMO2-203ENST00000411482 ATP5J2-PTCD1G3V325 749 aa23.53■■□□□ 1.36
LMO2-203ENST00000411482 UBE3BQ7Z3V4 1068 aa23.53■■□□□ 1.36
LMO2-203ENST00000411482 ECHDC1Q9NTX5 307 aa23.53■■□□□ 1.36
LMO2-203ENST00000411482 CWC25Q9NXE8 425 aaPredicted RBP23.53■■□□□ 1.36
LMO2-203ENST00000411482 COL24A1Q17RW2 1714 aa23.53■■□□□ 1.36
LMO2-203ENST00000411482 C4AP0C0L4 1744 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms