RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 KCNQ4P56696 695 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 PSMA6P60900 246 aaKnown RBP3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 CRTC2Q53ET0 693 aaPredicted RBP3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 TRAPPC3LQ5T215 181 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 C1orf53Q5VUE5 145 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 BTLAQ7Z6A9 289 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 FNBP4Q8N3X1 1017 aaPredicted RBP3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 C2orf49Q9BVC5 232 aaPredicted RBP3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 GSX2Q9BZM3 304 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 PRDM6Q9NQX0 595 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 ZFATQ9P243 1243 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 A0A0A0MRY4 1105 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 UBTFP17480 764 aaKnown RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 RASA1P20936 1047 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 AFF1P51825 1210 aaKnown RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 HIRAP54198 1017 aaPredicted RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 NRG1Q02297 640 aaPredicted RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 TRIM28Q13263 835 aaKnown RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 PRSS36Q5K4E3 855 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 KANK4Q5T7N3 995 aaPredicted RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 DMRTC2Q8IXT2 367 aaPredicted RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 SIX5Q8N196 739 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 LARGE2Q8N3Y3 721 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 DNAJB12Q9NXW2 375 aaKnown RBP3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 KLK14Q9P0G3 267 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 SLC6A14Q9UN76 642 aa3.76□□□□□ -1.81
RNU2-55P-201ENST00000411146 PALM3A6NDB9 673 aaPredicted RBP3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 TARSP26639 723 aaKnown RBP3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 MLLT1Q03111 559 aaPredicted RBP3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 DPYDQ12882 1025 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 GRIK5Q16478 980 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 CDCA8Q53HL2 280 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 PSAPL1Q6NUJ1 521 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 KRT25Q7Z3Z0 450 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 TRIM50Q86XT4 487 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 KRTAP1-3Q8IUG1 177 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 HINFPQ9BQA5 517 aa3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 UBE2OQ9C0C9 1292 aaKnown RBP3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 MAFBQ9Y5Q3 323 aaPredicted RBP3.75□□□□□ -1.81
RNU2-55P-201ENST00000411146 M0R2N6 131 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 RAD21O60216 631 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 APBA3O96018 575 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 NFKB1P19838 968 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 ATP1A2P50993 1020 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 PTK7Q13308 1070 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 MBTPS1Q14703 1052 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 PRRT3Q5FWE3 981 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 FAM26DQ5JW98 314 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 ARTNQ5T4W7 220 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 HFE2Q6ZVN8 426 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 GLMNQ92990 594 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 IFT43Q96FT9 208 aa3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 JPH1Q9HDC5 661 aaPredicted RBP3.74□□□□□ -1.81
RNU2-55P-201ENST00000411146 SPDYE3A6NKU9 549 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 OPLAHO14841 1288 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 LILRB5O75023 590 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 SASH3O75995 380 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 CPB1P15086 417 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 INPP5BP32019 993 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 ADGRE1Q14246 886 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 ARXQ96QS3 562 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 SSBP4Q9BWG4 385 aaPredicted RBP3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 ANKIB1Q9P2G1 1089 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 LRFN2Q9ULH4 789 aa3.73□□□□□ -1.81
RNU2-55P-201ENST00000411146 ALX3O95076 343 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 SEC13P55735 322 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 DGKZQ13574 1117 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 CCINQ13939 588 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 PERM1Q5SV97 790 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 CAPN12Q6ZSI9 719 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 LPIN3Q9BQK8 851 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 PPP1R12CQ9BZL4 782 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 QTRT2Q9H974 415 aaKnown RBP3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 ZFP64Q9NPA5 681 aa3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 GPC6Q9Y625 555 aaPredicted RBP3.72□□□□□ -1.81
RNU2-55P-201ENST00000411146 SCO2A0A1W2PP80 73 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 J3QW42 95 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 DEAF1O75398 565 aaPredicted RBP3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 NOS3P29474 1203 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 LMOD1P29536 600 aaPredicted RBP3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 IDH3AP50213 366 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 ADAMTSL4Q6UY14 1074 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 FAM35AQ86V20 835 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 FMR1NBQ8N0W7 255 aaPredicted RBP3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 STAG2Q8N3U4 1231 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 TP53INP1Q96A56 240 aa3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 LENG1Q96BZ8 264 aaPredicted RBP3.71□□□□□ -1.82
RNU2-55P-201ENST00000411146 C9orf172C9J069 976 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 TGFBR3LH3BV60 316 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 HYAL3O43820 417 aaPredicted RBP3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 RGS9O75916 674 aaPredicted RBP3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 MICAL2O94851 1124 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 H2AFB1P0C5Y9 115 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 H2AFB2P0C5Z0 115 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 ELNP15502 786 aa3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 IREB2P48200 963 aaKnown RBP3.7□□□□□ -1.82
RNU2-55P-201ENST00000411146 FLIIQ13045 1269 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms