RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 ZNF34Q8IZ26 560 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 GNAI2P04899 355 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 SUSD4Q5VX71 490 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 CCDC24Q8N4L8 307 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
PMS1-204ENST00000409823 GYS1P13807 737 aa15.79■□□□□ 0.12
PMS1-204ENST00000409823 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
PMS1-204ENST00000409823 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
PMS1-204ENST00000409823 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
PMS1-204ENST00000409823 IGHDP01880 384 aa15.79■□□□□ 0.12
PMS1-204ENST00000409823 CLEC4GQ6UXB4 293 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 NUP98P52948 1817 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 SIRT2Q8IXJ6 389 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 KAZALD1Q96I82 304 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 CHMP4BQ9H444 224 aaKnown RBP15.78■□□□□ 0.12
PMS1-204ENST00000409823 RGPD3A6NKT7 1758 aaPredicted RBP15.78■□□□□ 0.12
PMS1-204ENST00000409823 RGPD4Q7Z3J3 1758 aa15.78■□□□□ 0.12
PMS1-204ENST00000409823 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.12
PMS1-204ENST00000409823 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
PMS1-204ENST00000409823 TRIM28Q13263 835 aaKnown RBP15.77■□□□□ 0.11
PMS1-204ENST00000409823 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.11
PMS1-204ENST00000409823 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
PMS1-204ENST00000409823 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
PMS1-204ENST00000409823 NFIXQ14938 502 aa15.76■□□□□ 0.11
PMS1-204ENST00000409823 CEP85Q6P2H3 762 aa15.76■□□□□ 0.11
PMS1-204ENST00000409823 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
PMS1-204ENST00000409823 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
PMS1-204ENST00000409823 H7C1W4 665 aa15.76■□□□□ 0.11
PMS1-204ENST00000409823 CASP7P55210 303 aa15.76■□□□□ 0.11
PMS1-204ENST00000409823 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
PMS1-204ENST00000409823 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
PMS1-204ENST00000409823 NPHP1O15259 732 aa15.75■□□□□ 0.11
PMS1-204ENST00000409823 UTP14AQ9BVJ6 771 aaKnown RBP15.75■□□□□ 0.11
PMS1-204ENST00000409823 UTYO14607 1347 aa15.75■□□□□ 0.11
PMS1-204ENST00000409823 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
PMS1-204ENST00000409823 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
PMS1-204ENST00000409823 NBPF5PQ86XG9 351 aaPredicted RBP15.74■□□□□ 0.11
PMS1-204ENST00000409823 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
PMS1-204ENST00000409823 NTSR2O95665 410 aa15.74■□□□□ 0.11
PMS1-204ENST00000409823 PCCAP05165 728 aaPredicted RBP15.74■□□□□ 0.11
PMS1-204ENST00000409823 PARP10Q53GL7 1025 aa15.74■□□□□ 0.11
PMS1-204ENST00000409823 PPP1R42Q7Z4L9 355 aa15.74■□□□□ 0.11
PMS1-204ENST00000409823 FLAD1Q8NFF5 587 aa15.74■□□□□ 0.11
PMS1-204ENST00000409823 BCORQ6W2J9 1755 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 N4BP2Q86UW6 1770 aaPredicted RBP15.73■□□□□ 0.11
PMS1-204ENST00000409823 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
PMS1-204ENST00000409823 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 AAMPQ13685 434 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
PMS1-204ENST00000409823 ERFEQ4G0M1 354 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 SKAP1Q86WV1 359 aa15.73■□□□□ 0.11
PMS1-204ENST00000409823 PSDA5PKW4 1024 aaPredicted RBP15.72■□□□□ 0.11
PMS1-204ENST00000409823 APBB1O00213 710 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 LMBR1LQ6UX01 489 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 ANKRD44Q8N8A2 993 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 SH3TC1Q8TE82 1336 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 DDR1Q08345 913 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 KLHDC4Q8TBB5 520 aa15.72■□□□□ 0.11
PMS1-204ENST00000409823 FOXO4P98177 505 aa15.71■□□□□ 0.11
PMS1-204ENST00000409823 RPAP2Q8IXW5 612 aaPredicted RBP15.71■□□□□ 0.11
PMS1-204ENST00000409823 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
PMS1-204ENST00000409823 ANKRD36CQ5JPF3 1778 aa15.71■□□□□ 0.1
PMS1-204ENST00000409823 MMP10P09238 476 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 ATP8B2P98198 1209 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 TM4SF1P30408 202 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 TPTE2Q6XPS3 522 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
PMS1-204ENST00000409823 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 ZBTB7AO95365 584 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 SERPINB2P05120 415 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 C3orf67Q6ZVT6 689 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
PMS1-204ENST00000409823 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
PMS1-204ENST00000409823 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
PMS1-204ENST00000409823 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
PMS1-204ENST00000409823 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
PMS1-204ENST00000409823 SIL1Q9H173 461 aa15.69■□□□□ 0.1
PMS1-204ENST00000409823 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 FAM161AQ3B820 660 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 HDAC5Q9UQL6 1122 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 RGL2O15211 777 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 PRR5LQ6MZQ0 368 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 NYXQ9GZU5 481 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 GREM2Q9H772 168 aa15.68■□□□□ 0.1
PMS1-204ENST00000409823 CTSWP56202 376 aa15.67■□□□□ 0.1
PMS1-204ENST00000409823 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
PMS1-204ENST00000409823 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
PMS1-204ENST00000409823 PDE8AO60658 829 aa15.67■□□□□ 0.1
PMS1-204ENST00000409823 HMMRO75330 724 aa15.67■□□□□ 0.1
PMS1-204ENST00000409823 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
PMS1-204ENST00000409823 TTLL11Q8NHH1 800 aa15.67■□□□□ 0.1
PMS1-204ENST00000409823 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
PMS1-204ENST00000409823 SSH3Q8TE77 659 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms