RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 KCNA3P22001 575 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-205ENST00000409810 KSR2Q6VAB6 950 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHMP3-205ENST00000409810 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 ISCA1Q9BUE6 129 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
CHMP3-205ENST00000409810 ABCC12Q96J65 1359 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 LAMB2P55268 1798 aa13.94□□□□□ -0.18
CHMP3-205ENST00000409810 ERFEQ4G0M1 354 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 STYK1Q6J9G0 422 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
CHMP3-205ENST00000409810 TTLL6Q8N841 843 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 CNKSR1Q969H4 720 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 MASTLQ96GX5 879 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 MYD88Q99836 296 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-205ENST00000409810 TRMT112Q9UI30 125 aaKnown RBP13.93□□□□□ -0.18
CHMP3-205ENST00000409810 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
CHMP3-205ENST00000409810 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 PI4KAP2A4QPH2 592 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 SRGNP10124 158 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 NPR1P16066 1061 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 TRIM28Q13263 835 aaKnown RBP13.92□□□□□ -0.18
CHMP3-205ENST00000409810 PI4KAP1Q8N8J0 262 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 ADCY9O60503 1353 aa13.92□□□□□ -0.18
CHMP3-205ENST00000409810 DDX60Q8IY21 1712 aaKnown RBP13.91□□□□□ -0.18
CHMP3-205ENST00000409810 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-205ENST00000409810 HSP90B1P14625 803 aaKnown RBP13.91□□□□□ -0.18
CHMP3-205ENST00000409810 G2E3Q7L622 706 aa13.91□□□□□ -0.18
CHMP3-205ENST00000409810 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
CHMP3-205ENST00000409810 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
CHMP3-205ENST00000409810 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-205ENST00000409810 MYH3P11055 1940 aa13.91□□□□□ -0.18
CHMP3-205ENST00000409810 SLX4Q8IY92 1834 aa13.9□□□□□ -0.18
CHMP3-205ENST00000409810 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
CHMP3-205ENST00000409810 SLC10A5Q5PT55 438 aa13.9□□□□□ -0.18
CHMP3-205ENST00000409810 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
CHMP3-205ENST00000409810 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
CHMP3-205ENST00000409810 CRY2Q49AN0 593 aa13.89□□□□□ -0.19
CHMP3-205ENST00000409810 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
CHMP3-205ENST00000409810 ZBTB38Q8NAP3 1195 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-205ENST00000409810 YY1P25490 414 aa13.88□□□□□ -0.19
CHMP3-205ENST00000409810 ARHGAP27Q6ZUM4 889 aa13.88□□□□□ -0.19
CHMP3-205ENST00000409810 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
CHMP3-205ENST00000409810 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
CHMP3-205ENST00000409810 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
CHMP3-205ENST00000409810 PTPRCP08575 1304 aa13.88□□□□□ -0.19
CHMP3-205ENST00000409810 SBF1O95248 1867 aa13.87□□□□□ -0.19
CHMP3-205ENST00000409810 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
CHMP3-205ENST00000409810 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-205ENST00000409810 PCCAP05165 728 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-205ENST00000409810 PRPF40BQ6NWY9 871 aaKnown RBP13.87□□□□□ -0.19
CHMP3-205ENST00000409810 MRPL50Q8N5N7 158 aaKnown RBP13.87□□□□□ -0.19
CHMP3-205ENST00000409810 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
CHMP3-205ENST00000409810 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
CHMP3-205ENST00000409810 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
CHMP3-205ENST00000409810 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-205ENST00000409810 LINS1Q8NG48 757 aa13.86□□□□□ -0.19
CHMP3-205ENST00000409810 SSH1Q8WYL5 1049 aa13.86□□□□□ -0.19
CHMP3-205ENST00000409810 CRAMP1Q96RY5 1269 aa13.86□□□□□ -0.19
CHMP3-205ENST00000409810 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-205ENST00000409810 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
CHMP3-205ENST00000409810 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-205ENST00000409810 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
CHMP3-205ENST00000409810 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
CHMP3-205ENST00000409810 F6X3S4 739 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 C21orf2O43822 256 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-205ENST00000409810 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
CHMP3-205ENST00000409810 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-205ENST00000409810 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
CHMP3-205ENST00000409810 PDE8AO60658 829 aa13.83□□□□□ -0.2
CHMP3-205ENST00000409810 GCKRQ14397 625 aa13.83□□□□□ -0.2
CHMP3-205ENST00000409810 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
CHMP3-205ENST00000409810 CC2D2BQ6DHV5 1058 aa13.83□□□□□ -0.2
CHMP3-205ENST00000409810 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
CHMP3-205ENST00000409810 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
CHMP3-205ENST00000409810 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-205ENST00000409810 TAF1P21675 1872 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 PPEF1O14829 653 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-205ENST00000409810 ALDH1L1O75891 902 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
CHMP3-205ENST00000409810 GRAPQ13588 217 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-205ENST00000409810 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 TAOK3Q9H2K8 898 aa13.82□□□□□ -0.2
CHMP3-205ENST00000409810 ABCC4O15439 1325 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms