RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-206ENST00000409754 MYD88Q99836 296 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 STK32BQ9NY57 414 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
LIMS2-206ENST00000409754 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
LIMS2-206ENST00000409754 A1BGP04217 495 aa17.41■□□□□ 0.38
LIMS2-206ENST00000409754 GCKRQ14397 625 aa17.41■□□□□ 0.38
LIMS2-206ENST00000409754 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
LIMS2-206ENST00000409754 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
LIMS2-206ENST00000409754 GNPATO15228 680 aa17.4■□□□□ 0.38
LIMS2-206ENST00000409754 RC3H1Q5TC82 1133 aaKnown RBP17.4■□□□□ 0.38
LIMS2-206ENST00000409754 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
LIMS2-206ENST00000409754 HSP90AB4PQ58FF6 505 aa17.39■□□□□ 0.38
LIMS2-206ENST00000409754 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.38
LIMS2-206ENST00000409754 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.38
LIMS2-206ENST00000409754 SUCLG2Q96I99 432 aa17.39■□□□□ 0.38
LIMS2-206ENST00000409754 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.38
LIMS2-206ENST00000409754 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
LIMS2-206ENST00000409754 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
LIMS2-206ENST00000409754 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
LIMS2-206ENST00000409754 AK7Q96M32 723 aa17.39■□□□□ 0.37
LIMS2-206ENST00000409754 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.37
LIMS2-206ENST00000409754 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
LIMS2-206ENST00000409754 COL15A1P39059 1388 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 SALL3Q9BXA9 1300 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.38■□□□□ 0.37
LIMS2-206ENST00000409754 STARD3NLO95772 234 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 KAZALD1Q96I82 304 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
LIMS2-206ENST00000409754 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
LIMS2-206ENST00000409754 PHF14O94880 888 aa17.37■□□□□ 0.37
LIMS2-206ENST00000409754 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
LIMS2-206ENST00000409754 CDC45O75419 566 aa17.36■□□□□ 0.37
LIMS2-206ENST00000409754 PDE1AP54750 535 aa17.36■□□□□ 0.37
LIMS2-206ENST00000409754 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
LIMS2-206ENST00000409754 SSFA2P28290 1259 aa17.36■□□□□ 0.37
LIMS2-206ENST00000409754 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
LIMS2-206ENST00000409754 BICC1Q9H694 974 aaKnown RBP17.36■□□□□ 0.37
LIMS2-206ENST00000409754 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
LIMS2-206ENST00000409754 LRP5O75197 1615 aa17.35■□□□□ 0.37
LIMS2-206ENST00000409754 EIF5BO60841 1220 aaKnown RBP17.35■□□□□ 0.37
LIMS2-206ENST00000409754 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
LIMS2-206ENST00000409754 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
LIMS2-206ENST00000409754 TBC1D9Q6ZT07 1266 aa17.35■□□□□ 0.37
LIMS2-206ENST00000409754 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
LIMS2-206ENST00000409754 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
LIMS2-206ENST00000409754 AOX1Q06278 1338 aa17.34■□□□□ 0.37
LIMS2-206ENST00000409754 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
LIMS2-206ENST00000409754 MX1P20591 662 aa17.34■□□□□ 0.37
LIMS2-206ENST00000409754 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
LIMS2-206ENST00000409754 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.37
LIMS2-206ENST00000409754 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.37
LIMS2-206ENST00000409754 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.37
LIMS2-206ENST00000409754 A0A087WZG4 1122 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 SDSP20132 328 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 CASP7P55210 303 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 SGIP1Q9BQI5 828 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-206ENST00000409754 H7C1W4 665 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 RABL6Q3YEC7 729 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-206ENST00000409754 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
LIMS2-206ENST00000409754 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
LIMS2-206ENST00000409754 EPHA10Q5JZY3 1008 aa17.31■□□□□ 0.36
LIMS2-206ENST00000409754 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
LIMS2-206ENST00000409754 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
LIMS2-206ENST00000409754 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
LIMS2-206ENST00000409754 ADRA2BP18089 450 aa17.3■□□□□ 0.36
LIMS2-206ENST00000409754 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-206ENST00000409754 PTGER2P43116 358 aa17.3■□□□□ 0.36
LIMS2-206ENST00000409754 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
LIMS2-206ENST00000409754 ISCA1Q9BUE6 129 aa17.3■□□□□ 0.36
LIMS2-206ENST00000409754 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
LIMS2-206ENST00000409754 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
LIMS2-206ENST00000409754 PA2G4Q9UQ80 394 aaKnown RBP17.29■□□□□ 0.36
LIMS2-206ENST00000409754 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
LIMS2-206ENST00000409754 GYS1P13807 737 aa17.29■□□□□ 0.36
LIMS2-206ENST00000409754 RBM25P49756 843 aaKnown RBP17.29■□□□□ 0.36
LIMS2-206ENST00000409754 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMS2-206ENST00000409754 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
LIMS2-206ENST00000409754 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
LIMS2-206ENST00000409754 NUP98P52948 1817 aa17.28■□□□□ 0.36
LIMS2-206ENST00000409754 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
LIMS2-206ENST00000409754 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
LIMS2-206ENST00000409754 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-206ENST00000409754 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
LIMS2-206ENST00000409754 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
LIMS2-206ENST00000409754 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
LIMS2-206ENST00000409754 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
LIMS2-206ENST00000409754 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.36
LIMS2-206ENST00000409754 MTFR1LQ9H019 292 aa17.27■□□□□ 0.36
LIMS2-206ENST00000409754 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.36
LIMS2-206ENST00000409754 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms