RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
SNX13-202ENST00000409604 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
SNX13-202ENST00000409604 RAB11FIP3O75154 756 aa13.65□□□□□ -0.22
SNX13-202ENST00000409604 USP5P45974 858 aa13.65□□□□□ -0.22
SNX13-202ENST00000409604 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 MPHOSPH10O00566 681 aaKnown RBP13.64□□□□□ -0.23
SNX13-202ENST00000409604 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
SNX13-202ENST00000409604 HLFQ16534 295 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 CCDC144CPQ8IYA2 1237 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 SEC24BO95487 1268 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
SNX13-202ENST00000409604 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
SNX13-202ENST00000409604 BAG6P46379 1132 aa13.63□□□□□ -0.23
SNX13-202ENST00000409604 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
SNX13-202ENST00000409604 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
SNX13-202ENST00000409604 GRM1Q13255 1194 aa13.63□□□□□ -0.23
SNX13-202ENST00000409604 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
SNX13-202ENST00000409604 ANP32EQ9BTT0 268 aa13.63□□□□□ -0.23
SNX13-202ENST00000409604 PUS3Q9BZE2 481 aaKnown RBP13.63□□□□□ -0.23
SNX13-202ENST00000409604 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
SNX13-202ENST00000409604 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
SNX13-202ENST00000409604 RANBP6O60518 1105 aaKnown RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 NUCB1Q02818 461 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 ZC3H12CQ9C0D7 883 aaKnown RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 MROH1Q8NDA8 1641 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
SNX13-202ENST00000409604 PICALMQ13492 652 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 NACAP1Q9BZK3 213 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 NAPBQ9H115 298 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 SEC31BQ9NQW1 1179 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 FERMT3Q86UX7 667 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
SNX13-202ENST00000409604 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
SNX13-202ENST00000409604 SPATA31D1Q6ZQQ2 1576 aa13.61□□□□□ -0.23
SNX13-202ENST00000409604 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
SNX13-202ENST00000409604 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
SNX13-202ENST00000409604 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
SNX13-202ENST00000409604 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
SNX13-202ENST00000409604 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 ZBTB7AO95365 584 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 GUCY1B3Q02153 619 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
SNX13-202ENST00000409604 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 GREM2Q9H772 168 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 CPA1P15085 419 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 IL15P40933 162 aaPredicted RBP13.6□□□□□ -0.23
SNX13-202ENST00000409604 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
SNX13-202ENST00000409604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.235e-6■■■■□ 22.9
SNX13-202ENST00000409604 ADGRB1O14514 1584 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 CCT2P78371 535 aaKnown RBP13.59□□□□□ -0.23
SNX13-202ENST00000409604 TRIM29Q14134 588 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 SOS1Q07889 1333 aaPredicted RBP13.59□□□□□ -0.23
SNX13-202ENST00000409604 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 CYP7A1P22680 504 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 UFL1O94874 794 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 POLD1P28340 1107 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 GPR101Q96P66 508 aaPredicted RBP13.59□□□□□ -0.23
SNX13-202ENST00000409604 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
SNX13-202ENST00000409604 TRIM44Q96DX7 344 aaPredicted RBP13.58□□□□□ -0.23
SNX13-202ENST00000409604 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.23
SNX13-202ENST00000409604 HIP1O00291 1037 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 ZNF853P0CG23 659 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
SNX13-202ENST00000409604 BCS1LQ9Y276 419 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 GJA3Q9Y6H8 435 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 JCADQ9P266 1359 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 DIP2AQ14689 1571 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 EYA2O00167 538 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 PSMA5P28066 241 aa13.58□□□□□ -0.24
SNX13-202ENST00000409604 CCDC83Q8IWF9 413 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 GYG1P46976 350 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 UBAC1Q9BSL1 405 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 FIBPO43427 364 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 PDE8AO60658 829 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 TTLL12Q14166 644 aaPredicted RBP13.57□□□□□ -0.24
SNX13-202ENST00000409604 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
SNX13-202ENST00000409604 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
SNX13-202ENST00000409604 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
SNX13-202ENST00000409604 VEZTQ9HBM0 779 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms