RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 FAM98CQ17RN3 349 aaKnown RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 TSR1Q2NL82 804 aaKnown RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 MNS1Q8NEH6 495 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 TMEM94Q12767 1356 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 WDR33Q9C0J8 1336 aaKnown RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
ITGB6-202ENST00000409583 PDE1AP54750 535 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 NUCB1Q02818 461 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC112Q8NEF3 446 aa10.69□□□□□ -0.7
ITGB6-202ENST00000409583 RASSF4Q9H2L5 321 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 POLR3DP05423 398 aaPredicted RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 PRIM1P49642 420 aaKnown RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 FAM89AQ96GI7 184 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 SETDB2Q96T68 719 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 ZBTB40Q9NUA8 1239 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 ROBO2Q9HCK4 1378 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 ALDH1L1O75891 902 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 CCAR2Q8N163 923 aaKnown RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 KLHDC4Q8TBB5 520 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 PAIP2Q9BPZ3 127 aaKnown RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 CHL1O00533 1208 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 KCNQ3O43525 872 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
ITGB6-202ENST00000409583 KRT85P78386 507 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 EVI5LQ96CN4 794 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 MKNK2Q9HBH9 465 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
ITGB6-202ENST00000409583 PREX2Q70Z35 1606 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 MBD3O95983 291 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 PCDH11XQ9BZA7 1347 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 PCDH11YQ9BZA8 1340 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
ITGB6-202ENST00000409583 ATP2B3Q16720 1220 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 ZNF213O14771 459 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 TPM1P09493 284 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 PRR36Q9H6K5 1346 aa10.67□□□□□ -0.7
ITGB6-202ENST00000409583 NOC3LQ8WTT2 800 aaKnown RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 PRDM15P57071 1507 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 EFCAB6Q5THR3 1501 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 CT47A1Q5JQC4 288 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC91Q7Z6B0 441 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC24Q8N4L8 307 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 ANKRD20A12PQ8NF67 263 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 NLRP3Q96P20 1036 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC152Q4G0S7 254 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 HSP90B2PQ58FF3 399 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 KRT222Q8N1A0 295 aa10.66□□□□□ -0.7
ITGB6-202ENST00000409583 ZSCAN31Q96LW9 406 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 ZNF396Q96N95 335 aaPredicted RBP10.66□□□□□ -0.7
ITGB6-202ENST00000409583 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.7
ITGB6-202ENST00000409583 CRACR2BQ8N4Y2 399 aaPredicted RBP10.65□□□□□ -0.7
ITGB6-202ENST00000409583 IL17REQ8NFR9 667 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 FEZ1Q99689 392 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 TFCP2L1Q9NZI6 479 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 TMOD2Q9NZR1 351 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 JAG2Q9Y219 1238 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 ANKRD18AQ8IVF6 992 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 PSMD1Q99460 953 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 BICC1Q9H694 974 aaKnown RBP10.65□□□□□ -0.7
ITGB6-202ENST00000409583 IRS4O14654 1257 aaPredicted RBP10.65□□□□□ -0.7
ITGB6-202ENST00000409583 GNPATO15228 680 aa10.65□□□□□ -0.7
ITGB6-202ENST00000409583 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.7
ITGB6-202ENST00000409583 F8W031 263 aaPredicted RBP10.65□□□□□ -0.71
ITGB6-202ENST00000409583 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.71
ITGB6-202ENST00000409583 SOGA3Q5TF21 947 aa10.65□□□□□ -0.71
ITGB6-202ENST00000409583 SPATA32Q96LK8 384 aa10.65□□□□□ -0.71
ITGB6-202ENST00000409583 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.71
ITGB6-202ENST00000409583 RTCBQ9Y3I0 505 aaKnown RBP10.65□□□□□ -0.71
ITGB6-202ENST00000409583 HCLS1P14317 486 aaPredicted RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 GABPB1Q06547 395 aaPredicted RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 CCAR1Q8IX12 1150 aaKnown RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 TRIM5Q9C035 493 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 ERVK-7P63135 1459 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 IFIT3O14879 490 aaKnown RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 NBPF7P0C2Y1 421 aaPredicted RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 USP19O94966 1318 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 TIMM10P62072 90 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 SLC52A2Q9HAB3 445 aa10.64□□□□□ -0.71
ITGB6-202ENST00000409583 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
ITGB6-202ENST00000409583 OLFM4Q6UX06 510 aa10.63□□□□□ -0.71
ITGB6-202ENST00000409583 ZHX3Q9H4I2 956 aa10.63□□□□□ -0.71
ITGB6-202ENST00000409583 SBNO2Q9Y2G9 1366 aa10.63□□□□□ -0.71
ITGB6-202ENST00000409583 SSFA2P28290 1259 aa10.63□□□□□ -0.71
ITGB6-202ENST00000409583 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
ITGB6-202ENST00000409583 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
ITGB6-202ENST00000409583 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms