RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 LAMB2P55268 1798 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 ADRA2BP18089 450 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 NLRP10Q86W26 655 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
SSB-202ENST00000409333 USP42Q9H9J4 1324 aaKnown RBP21.1■□□□□ 0.97
SSB-202ENST00000409333 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
SSB-202ENST00000409333 ZPR1O75312 459 aa21.09■□□□□ 0.97
SSB-202ENST00000409333 RFC4P35249 363 aa21.09■□□□□ 0.97
SSB-202ENST00000409333 ANKRD44Q8N8A2 993 aa21.09■□□□□ 0.97
SSB-202ENST00000409333 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
SSB-202ENST00000409333 CASP7P55210 303 aa21.08■□□□□ 0.97
SSB-202ENST00000409333 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
SSB-202ENST00000409333 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.97
SSB-202ENST00000409333 CLEC4GQ6UXB4 293 aa21.08■□□□□ 0.97
SSB-202ENST00000409333 KAZALD1Q96I82 304 aa21.08■□□□□ 0.97
SSB-202ENST00000409333 H7C1W4 665 aa21.08■□□□□ 0.96
SSB-202ENST00000409333 RPAP2Q8IXW5 612 aaPredicted RBP21.08■□□□□ 0.96
SSB-202ENST00000409333 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.96
SSB-202ENST00000409333 TFCP2L1Q9NZI6 479 aa21.08■□□□□ 0.96
SSB-202ENST00000409333 NIP7Q9Y221 180 aaKnown RBP eCLIP21.07■□□□□ 0.96
SSB-202ENST00000409333 RGL2O15211 777 aa21.06■□□□□ 0.96
SSB-202ENST00000409333 CENPQQ7L2Z9 268 aaPredicted RBP21.06■□□□□ 0.96
SSB-202ENST00000409333 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
SSB-202ENST00000409333 CCDC125Q86Z20 511 aa21.05■□□□□ 0.96
SSB-202ENST00000409333 BICC1Q9H694 974 aaKnown RBP21.05■□□□□ 0.96
SSB-202ENST00000409333 PNMA6EA0A0J9YXQ4 647 aa21.05■□□□□ 0.96
SSB-202ENST00000409333 TBC1D9BQ66K14 1250 aa21.05■□□□□ 0.96
SSB-202ENST00000409333 PCCAP05165 728 aaPredicted RBP21.04■□□□□ 0.96
SSB-202ENST00000409333 ATP8B2P98198 1209 aa21.04■□□□□ 0.96
SSB-202ENST00000409333 EPHA10Q5JZY3 1008 aa21.04■□□□□ 0.96
SSB-202ENST00000409333 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
SSB-202ENST00000409333 ZBTB38Q8NAP3 1195 aaPredicted RBP21.04■□□□□ 0.96
SSB-202ENST00000409333 FAM89AQ96GI7 184 aa21.04■□□□□ 0.96
SSB-202ENST00000409333 FAM177BA6PVY3 158 aa21.03■□□□□ 0.96
SSB-202ENST00000409333 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SSB-202ENST00000409333 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
SSB-202ENST00000409333 TRMT112Q9UI30 125 aaKnown RBP21.03■□□□□ 0.96
SSB-202ENST00000409333 HDAC5Q9UQL6 1122 aa21.03■□□□□ 0.96
SSB-202ENST00000409333 PNPLA7Q6ZV29 1317 aa21.03■□□□□ 0.96
SSB-202ENST00000409333 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
SSB-202ENST00000409333 PPP1R42Q7Z4L9 355 aa21.02■□□□□ 0.96
SSB-202ENST00000409333 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
SSB-202ENST00000409333 GYS1P13807 737 aa21.01■□□□□ 0.95
SSB-202ENST00000409333 SLC15A2Q16348 729 aa21.01■□□□□ 0.95
SSB-202ENST00000409333 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
SSB-202ENST00000409333 SRGAP3O43295 1099 aa21■□□□□ 0.95
SSB-202ENST00000409333 HMMRO75330 724 aa21■□□□□ 0.95
SSB-202ENST00000409333 NTSR2O95665 410 aa21■□□□□ 0.95
SSB-202ENST00000409333 FOXO4P98177 505 aa21■□□□□ 0.95
SSB-202ENST00000409333 MTX1Q13505 466 aa21■□□□□ 0.95
SSB-202ENST00000409333 UTP14AQ9BVJ6 771 aaKnown RBP21■□□□□ 0.95
SSB-202ENST00000409333 STK32BQ9NY57 414 aa21■□□□□ 0.95
SSB-202ENST00000409333 SSH3Q8TE77 659 aa21■□□□□ 0.95
SSB-202ENST00000409333 RABL6Q3YEC7 729 aaPredicted RBP20.99■□□□□ 0.95
SSB-202ENST00000409333 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
SSB-202ENST00000409333 UPF1Q92900 1129 aaKnown RBP eCLIP20.99■□□□□ 0.95
SSB-202ENST00000409333 SETDB2Q96T68 719 aa20.99■□□□□ 0.95
SSB-202ENST00000409333 MSH5O43196 834 aa20.98■□□□□ 0.95
SSB-202ENST00000409333 POLA2Q14181 598 aa20.98■□□□□ 0.95
SSB-202ENST00000409333 FLAD1Q8NFF5 587 aa20.98■□□□□ 0.95
SSB-202ENST00000409333 SH3TC1Q8TE82 1336 aa20.98■□□□□ 0.95
SSB-202ENST00000409333 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
SSB-202ENST00000409333 NFIXQ14938 502 aa20.97■□□□□ 0.95
SSB-202ENST00000409333 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
SSB-202ENST00000409333 IRS4O14654 1257 aaPredicted RBP20.97■□□□□ 0.95
SSB-202ENST00000409333 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
SSB-202ENST00000409333 PLA2G12BQ9BX93 195 aa20.97■□□□□ 0.95
SSB-202ENST00000409333 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
SSB-202ENST00000409333 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
SSB-202ENST00000409333 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
SSB-202ENST00000409333 LMBR1LQ6UX01 489 aa20.96■□□□□ 0.95
SSB-202ENST00000409333 GCC1Q96CN9 775 aa20.96■□□□□ 0.95
SSB-202ENST00000409333 TAF1P21675 1872 aa20.96■□□□□ 0.95
SSB-202ENST00000409333 NRXN2Q9P2S2 1712 aa20.95■□□□□ 0.94
SSB-202ENST00000409333 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
SSB-202ENST00000409333 HCLS1P14317 486 aaPredicted RBP20.94■□□□□ 0.94
SSB-202ENST00000409333 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
SSB-202ENST00000409333 NBPF5PQ86XG9 351 aaPredicted RBP20.94■□□□□ 0.94
SSB-202ENST00000409333 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
SSB-202ENST00000409333 CHMP3Q9Y3E7 222 aa20.94■□□□□ 0.94
SSB-202ENST00000409333 NYXQ9GZU5 481 aa20.93■□□□□ 0.94
SSB-202ENST00000409333 PDZRN3Q9UPQ7 1066 aa20.93■□□□□ 0.94
SSB-202ENST00000409333 PDE8AO60658 829 aa20.92■□□□□ 0.94
SSB-202ENST00000409333 TM4SF1P30408 202 aa20.92■□□□□ 0.94
SSB-202ENST00000409333 CTSWP56202 376 aa20.92■□□□□ 0.94
SSB-202ENST00000409333 PA2G4Q9UQ80 394 aaKnown RBP20.92■□□□□ 0.94
SSB-202ENST00000409333 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
SSB-202ENST00000409333 RFX5P48382 616 aaPredicted RBP20.92■□□□□ 0.94
SSB-202ENST00000409333 KLHDC4Q8TBB5 520 aa20.92■□□□□ 0.94
SSB-202ENST00000409333 CCDC85AQ96PX6 553 aaPredicted RBP20.92■□□□□ 0.94
SSB-202ENST00000409333 APBB1O00213 710 aa20.91■□□□□ 0.94
SSB-202ENST00000409333 CSF1RP07333 972 aa20.91■□□□□ 0.94
SSB-202ENST00000409333 DDR1Q08345 913 aa20.91■□□□□ 0.94
SSB-202ENST00000409333 FAM161AQ3B820 660 aa20.91■□□□□ 0.94
SSB-202ENST00000409333 TTLL11Q8NHH1 800 aa20.91■□□□□ 0.94
SSB-202ENST00000409333 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
SSB-202ENST00000409333 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
SSB-202ENST00000409333 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms