RNA–Protein interactions for RNA: ENST00000409300.5

RAD9B-204, Transcript of RAD9 checkpoint clamp component B, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAD9B, Length 2,732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD9B-204	ENST00000409300	COL15A1	P39059	1388 aa		13.92	□□□□□ -0.18
RAD9B-204	ENST00000409300	GNPAT	O15228	680 aa		13.92	□□□□□ -0.18
RAD9B-204	ENST00000409300	RGS17	Q9UGC6	210 aa	Predicted RBP	13.92	□□□□□ -0.18
RAD9B-204	ENST00000409300	NLRP10	Q86W26	655 aa		13.92	□□□□□ -0.18
RAD9B-204	ENST00000409300	TRIM28	Q13263	835 aa	Known RBP	13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	RHPN1	Q8TCX5	695 aa		13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	CAMTA2	O94983	1202 aa		13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	TSHZ3	Q63HK5	1081 aa		13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	LRRC4B	Q9NT99	713 aa		13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	TRMT112	Q9UI30	125 aa	Known RBP	13.91	□□□□□ -0.18
RAD9B-204	ENST00000409300	RAB11FIP3	O75154	756 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	FOXO4	P98177	505 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	HSP90AB4P	Q58FF6	505 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	POTEA	Q6S8J7	498 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	UBN2	Q6ZU65	1347 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	CNTNAP4	Q9C0A0	1308 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	RABL6	Q3YEC7	729 aa	Predicted RBP	13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	KIF1BP	Q96EK5	621 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	NUP98	P52948	1817 aa		13.9	□□□□□ -0.18
RAD9B-204	ENST00000409300	COL5A3	P25940	1745 aa	Predicted RBP	13.9	□□□□□ -0.19
RAD9B-204	ENST00000409300	PHF14	O94880	888 aa		13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	AMIGO3	Q86WK7	504 aa		13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	NOP58	Q9Y2X3	529 aa	Known RBP	13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	PCCA	P05165	728 aa	Predicted RBP	13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	NUTM1	Q86Y26	1132 aa		13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	RTCB	Q9Y3I0	505 aa	Known RBP	13.89	□□□□□ -0.19
RAD9B-204	ENST00000409300	ZNF34	Q8IZ26	560 aa		13.88	□□□□□ -0.19
RAD9B-204	ENST00000409300	RPS6KA4	O75676	772 aa		13.88	□□□□□ -0.19
RAD9B-204	ENST00000409300	BICDL1	Q6ZP65	573 aa		13.88	□□□□□ -0.19
RAD9B-204	ENST00000409300	CIC	Q96RK0	1608 aa	Predicted RBP	13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	SEC24B	O95487	1268 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	PTPN12	Q05209	780 aa	Known RBP	13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	BMP2KL	Q5H9B9	411 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	RC3H1	Q5TC82	1133 aa	Known RBP	13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	AK7	Q96M32	723 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	GSPT1	P15170	499 aa	Known RBP	13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	MX1	P20591	662 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	PDE1A	P54750	535 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	SUSD4	Q5VX71	490 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	SRP68	Q9UHB9	627 aa	Known RBP	13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	ZNF652	Q9Y2D9	606 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	ZNF831	Q5JPB2	1677 aa		13.87	□□□□□ -0.19
RAD9B-204	ENST00000409300	IRS4	O14654	1257 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	RFX5	P48382	616 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	USPL1	Q5W0Q7	1092 aa		13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	ZPR1	O75312	459 aa		13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	SASH1	O94885	1247 aa		13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	TTC22	Q5TAA0	569 aa		13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	CLASRP	Q8N2M8	674 aa	Known RBP	13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	ZNF594	Q96JF6	807 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	RREB1	Q92766	1687 aa		13.86	□□□□□ -0.19
RAD9B-204	ENST00000409300	APBA3	O96018	575 aa		13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	ERC1	Q8IUD2	1116 aa		13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	ARHGEF1	Q92888	912 aa	Known RBP	13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	COPRS	Q9NQ92	184 aa		13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	LY75	O60449	1722 aa		13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	CCDC57	Q2TAC2	916 aa		13.85	□□□□□ -0.19
RAD9B-204	ENST00000409300	HCLS1	P14317	486 aa	Predicted RBP	13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	UTP14A	Q9BVJ6	771 aa	Known RBP	13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	RFC4	P35249	363 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	TXNRD1	Q16881	649 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	TRAPPC3L	Q5T215	181 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	CLEC4G	Q6UXB4	293 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	ANKRD36C	Q5JPF3	1778 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	SH3TC1	Q8TE82	1336 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	SALL3	Q9BXA9	1300 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	AACS	Q86V21	672 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	PROM2	Q8N271	834 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	NARF	Q9UHQ1	456 aa		13.84	□□□□□ -0.19
RAD9B-204	ENST00000409300	TAF1L	Q8IZX4	1826 aa		13.83	□□□□□ -0.19
RAD9B-204	ENST00000409300	CDHR2	Q9BYE9	1310 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	IFIT2	P09913	472 aa	Known RBP	13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	PARP10	Q53GL7	1025 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	SLC27A3	Q5K4L6	730 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	TBC1D9B	Q66K14	1250 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	SDS	P20132	328 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	CTSW	P56202	376 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	IFIT5	Q13325	482 aa	Known RBP	13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	TAF7L	Q5H9L4	462 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	TTLL11	Q8NHH1	800 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	OSBPL3	Q9H4L5	887 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	GREM2	Q9H772	168 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	BCL2L12	Q9HB09	334 aa		13.83	□□□□□ -0.2
RAD9B-204	ENST00000409300	C4B	P0C0L5	1744 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	TFCP2	Q12800	502 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	EAF2	Q96CJ1	260 aa	Predicted RBP	13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	PLA2G12B	Q9BX93	195 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	TRIM6-TRIM34	B2RNG4	842 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	PDE8A	O60658	829 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	LRRC24	Q50LG9	513 aa		13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	PUS3	Q9BZE2	481 aa	Known RBP	13.82	□□□□□ -0.2
RAD9B-204	ENST00000409300	NTSR2	O95665	410 aa		13.81	□□□□□ -0.2
RAD9B-204	ENST00000409300	CSF1R	P07333	972 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms