RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RGL2O15211 777 aa17.34■□□□□ 0.37
CHRNA1-203ENST00000409219 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
CHRNA1-203ENST00000409219 USP50Q70EL3 339 aaPredicted RBP17.34■□□□□ 0.37
CHRNA1-203ENST00000409219 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.37
CHRNA1-203ENST00000409219 SLC51AQ86UW1 340 aa17.33■□□□□ 0.37
CHRNA1-203ENST00000409219 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 CA12O43570 354 aa17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
CHRNA1-203ENST00000409219 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 HLFQ16534 295 aa17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 NUP98P52948 1817 aa17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
CHRNA1-203ENST00000409219 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
CHRNA1-203ENST00000409219 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
CHRNA1-203ENST00000409219 DGKZQ13574 1117 aa17.3■□□□□ 0.36
CHRNA1-203ENST00000409219 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
CHRNA1-203ENST00000409219 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
CHRNA1-203ENST00000409219 HHIPL1Q96JK4 782 aa17.29■□□□□ 0.36
CHRNA1-203ENST00000409219 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
CHRNA1-203ENST00000409219 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
CHRNA1-203ENST00000409219 GLIS2Q9BZE0 524 aaPredicted RBP17.28■□□□□ 0.36
CHRNA1-203ENST00000409219 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
CHRNA1-203ENST00000409219 CIAPIN1Q6FI81 312 aa17.27■□□□□ 0.36
CHRNA1-203ENST00000409219 NIM1KQ8IY84 436 aa17.27■□□□□ 0.36
CHRNA1-203ENST00000409219 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
CHRNA1-203ENST00000409219 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
CHRNA1-203ENST00000409219 PPEF1O14829 653 aaPredicted RBP17.25■□□□□ 0.35
CHRNA1-203ENST00000409219 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
CHRNA1-203ENST00000409219 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
CHRNA1-203ENST00000409219 AOC3Q16853 763 aa17.25■□□□□ 0.35
CHRNA1-203ENST00000409219 ZIC5Q96T25 663 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 UBN2Q6ZU65 1347 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 MCM10Q7L590 875 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 ZNF408Q9H9D4 720 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
CHRNA1-203ENST00000409219 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
CHRNA1-203ENST00000409219 CXCL9Q07325 125 aa17.23■□□□□ 0.35
CHRNA1-203ENST00000409219 NOGQ13253 232 aa17.23■□□□□ 0.35
CHRNA1-203ENST00000409219 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
CHRNA1-203ENST00000409219 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
CHRNA1-203ENST00000409219 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
CHRNA1-203ENST00000409219 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
CHRNA1-203ENST00000409219 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 GPTP24298 496 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 SOX10P56693 466 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
CHRNA1-203ENST00000409219 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
CHRNA1-203ENST00000409219 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
CHRNA1-203ENST00000409219 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
CHRNA1-203ENST00000409219 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
CHRNA1-203ENST00000409219 NTSR2O95665 410 aa17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 LAMB2P55268 1798 aa17.19■□□□□ 0.34
CHRNA1-203ENST00000409219 HUNKP57058 714 aa17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
CHRNA1-203ENST00000409219 FAM155AB1AL88 458 aaPredicted RBP17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 KIF6Q6ZMV9 814 aa17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 BCL2L13Q9BXK5 485 aa17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
CHRNA1-203ENST00000409219 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 ABCC4O15439 1325 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 RAD17O75943 681 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
CHRNA1-203ENST00000409219 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CHRNA1-203ENST00000409219 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
CHRNA1-203ENST00000409219 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms