RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 ARXQ96QS3 562 aa13.94□□□□□ -0.18
RAB1C-201ENST00000409159 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
RAB1C-201ENST00000409159 PNMA6EA0A0J9YXQ4 647 aa13.93□□□□□ -0.18
RAB1C-201ENST00000409159 ZPR1O75312 459 aa13.93□□□□□ -0.18
RAB1C-201ENST00000409159 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
RAB1C-201ENST00000409159 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
RAB1C-201ENST00000409159 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
RAB1C-201ENST00000409159 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
RAB1C-201ENST00000409159 PROM2Q8N271 834 aa13.92□□□□□ -0.18
RAB1C-201ENST00000409159 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
RAB1C-201ENST00000409159 UTP14AQ9BVJ6 771 aaKnown RBP13.92□□□□□ -0.18
RAB1C-201ENST00000409159 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
RAB1C-201ENST00000409159 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
RAB1C-201ENST00000409159 CSF1RP07333 972 aa13.91□□□□□ -0.18
RAB1C-201ENST00000409159 RFC4P35249 363 aa13.91□□□□□ -0.18
RAB1C-201ENST00000409159 FOXO4P98177 505 aa13.91□□□□□ -0.18
RAB1C-201ENST00000409159 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
RAB1C-201ENST00000409159 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
RAB1C-201ENST00000409159 SH3TC1Q8TE82 1336 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
RAB1C-201ENST00000409159 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 KCNQ4P56696 695 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB1C-201ENST00000409159 RGPD3A6NKT7 1758 aaPredicted RBP13.9□□□□□ -0.18
RAB1C-201ENST00000409159 RGPD4Q7Z3J3 1758 aa13.9□□□□□ -0.18
RAB1C-201ENST00000409159 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.19
RAB1C-201ENST00000409159 PDE8AO60658 829 aa13.89□□□□□ -0.19
RAB1C-201ENST00000409159 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
RAB1C-201ENST00000409159 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
RAB1C-201ENST00000409159 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
RAB1C-201ENST00000409159 SLC10A5Q5PT55 438 aa13.89□□□□□ -0.19
RAB1C-201ENST00000409159 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
RAB1C-201ENST00000409159 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
RAB1C-201ENST00000409159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
RAB1C-201ENST00000409159 IRS4O14654 1257 aaPredicted RBP13.88□□□□□ -0.19
RAB1C-201ENST00000409159 NTSR2O95665 410 aa13.88□□□□□ -0.19
RAB1C-201ENST00000409159 GPTP24298 496 aa13.88□□□□□ -0.19
RAB1C-201ENST00000409159 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
RAB1C-201ENST00000409159 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
RAB1C-201ENST00000409159 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
RAB1C-201ENST00000409159 SETDB2Q96T68 719 aa13.88□□□□□ -0.19
RAB1C-201ENST00000409159 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
RAB1C-201ENST00000409159 RTL9Q8NET4 1388 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 CIAO1O76071 339 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 BAG6P46379 1132 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 CTSWP56202 376 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
RAB1C-201ENST00000409159 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
RAB1C-201ENST00000409159 PDE4AP27815 886 aa13.86□□□□□ -0.19
RAB1C-201ENST00000409159 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
RAB1C-201ENST00000409159 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
RAB1C-201ENST00000409159 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
RAB1C-201ENST00000409159 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
RAB1C-201ENST00000409159 AOX1Q06278 1338 aa13.86□□□□□ -0.19
RAB1C-201ENST00000409159 RGS3P49796 1198 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 CCDC57Q2TAC2 916 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 TTLL11Q8NHH1 800 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
RAB1C-201ENST00000409159 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 IL15P40933 162 aaPredicted RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 OS9Q13438 667 aaPredicted RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 GPR108Q9NPR9 543 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
RAB1C-201ENST00000409159 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
RAB1C-201ENST00000409159 ANKRD18BA2A2Z9 1011 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 EYA2O00167 538 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 GYS1P13807 737 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 CCDC152Q4G0S7 254 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.2
RAB1C-201ENST00000409159 TNS1Q9HBL0 1735 aaKnown RBP13.83□□□□□ -0.2
RAB1C-201ENST00000409159 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.2
RAB1C-201ENST00000409159 PHF14O94880 888 aa13.82□□□□□ -0.2
RAB1C-201ENST00000409159 TM4SF1P30408 202 aa13.82□□□□□ -0.2
RAB1C-201ENST00000409159 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
RAB1C-201ENST00000409159 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
RAB1C-201ENST00000409159 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
RAB1C-201ENST00000409159 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
RAB1C-201ENST00000409159 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
RAB1C-201ENST00000409159 NFIXQ14938 502 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms