RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 STYK1Q6J9G0 422 aa12.2□□□□□ -0.46
NIF3L1-203ENST00000409129 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
NIF3L1-203ENST00000409129 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
NIF3L1-203ENST00000409129 IQCA1LA6NCM1 817 aa12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 SRGNP10124 158 aa12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 CYP4F22Q6NT55 531 aa12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 PAXIP1Q6ZW49 1069 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-203ENST00000409129 BCORQ6W2J9 1755 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 CAPNS2Q96L46 248 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
NIF3L1-203ENST00000409129 RGL2O15211 777 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 AOC2O75106 756 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 EPHX2P34913 555 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 SOGA3Q5TF21 947 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
NIF3L1-203ENST00000409129 NEFMP07197 916 aa12.16□□□□□ -0.46
NIF3L1-203ENST00000409129 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
NIF3L1-203ENST00000409129 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
NIF3L1-203ENST00000409129 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
NIF3L1-203ENST00000409129 COL4A5P29400 1685 aa12.16□□□□□ -0.46
NIF3L1-203ENST00000409129 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 NPR1P16066 1061 aa12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 SOX10P56693 466 aa12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 GPR101Q96P66 508 aaPredicted RBP12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 BEGAINQ9BUH8 593 aa12.15□□□□□ -0.46
NIF3L1-203ENST00000409129 TRAF5O00463 557 aa12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 DGKZQ13574 1117 aa12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 HLFQ16534 295 aa12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-203ENST00000409129 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
NIF3L1-203ENST00000409129 CCDC93Q567U6 631 aa12.13□□□□□ -0.47
NIF3L1-203ENST00000409129 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-203ENST00000409129 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 ALDH1B1P30837 517 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 NFE2L2Q16236 605 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 CST9Q5W186 159 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-203ENST00000409129 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-203ENST00000409129 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
NIF3L1-203ENST00000409129 RTKN2Q8IZC4 609 aa12.11□□□□□ -0.47
NIF3L1-203ENST00000409129 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-203ENST00000409129 ECE1P42892 770 aa12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
NIF3L1-203ENST00000409129 MYL6BP14649 208 aa12.09□□□□□ -0.47
NIF3L1-203ENST00000409129 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
NIF3L1-203ENST00000409129 TTLL7Q6ZT98 887 aa12.09□□□□□ -0.47
NIF3L1-203ENST00000409129 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-203ENST00000409129 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 ZIC5Q96T25 663 aa12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.48
NIF3L1-203ENST00000409129 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 FZD9O00144 591 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 GPTP24298 496 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 EPS15P42566 896 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 SLC51AQ86UW1 340 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
NIF3L1-203ENST00000409129 HOXA10P31260 410 aaPredicted RBP12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 RIPK4P57078 832 aa12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 GIGYF2Q6Y7W6 1299 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 RPGRQ92834 1020 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 PSMD1Q99460 953 aa12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
NIF3L1-203ENST00000409129 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms