RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
GPC3-203ENST00000406757 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
GPC3-203ENST00000406757 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
GPC3-203ENST00000406757 ZBTB1Q9Y2K1 713 aa10.66□□□□□ -0.7
GPC3-203ENST00000406757 BRCA1P38398 1863 aaKnown RBP10.66□□□□□ -0.7
GPC3-203ENST00000406757 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
GPC3-203ENST00000406757 ZPR1O75312 459 aa10.65□□□□□ -0.7
GPC3-203ENST00000406757 STARD3NLO95772 234 aa10.65□□□□□ -0.7
GPC3-203ENST00000406757 USPL1Q5W0Q7 1092 aa10.65□□□□□ -0.7
GPC3-203ENST00000406757 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
GPC3-203ENST00000406757 ZNF428Q96B54 188 aa10.65□□□□□ -0.7
GPC3-203ENST00000406757 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
GPC3-203ENST00000406757 DDX21Q9NR30 783 aaKnown RBP eCLIP10.65□□□□□ -0.7
GPC3-203ENST00000406757 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
GPC3-203ENST00000406757 SOS1Q07889 1333 aaPredicted RBP10.64□□□□□ -0.71
GPC3-203ENST00000406757 F6X3S4 739 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 TM4SF1P30408 202 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 FLIIQ13045 1269 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 C16orf71Q8IYS4 520 aaPredicted RBP10.64□□□□□ -0.71
GPC3-203ENST00000406757 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 RNF181Q9P0P0 153 aa10.64□□□□□ -0.71
GPC3-203ENST00000406757 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 RLBP1P12271 317 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 HTRA3P83110 453 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
GPC3-203ENST00000406757 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 HYPKQ9NX55 129 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 ARFGEF1Q9Y6D6 1849 aa10.63□□□□□ -0.71
GPC3-203ENST00000406757 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 TRIM27P14373 513 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 RASSF7Q02833 373 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 NFIXQ14938 502 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 SLC4A10Q6U841 1118 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
GPC3-203ENST00000406757 RRAGCQ9HB90 399 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 TBC1D2BQ9UPU7 963 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 COL15A1P39059 1388 aa10.62□□□□□ -0.71
GPC3-203ENST00000406757 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 PI4KAP2A4QPH2 592 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
GPC3-203ENST00000406757 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
GPC3-203ENST00000406757 ATF7IPQ6VMQ6 1270 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 PI4KAP1Q8N8J0 262 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.61□□□□□ -0.71
GPC3-203ENST00000406757 CRBNQ96SW2 442 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 ZBTB3Q9H5J0 574 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
GPC3-203ENST00000406757 SERPINB2P05120 415 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
GPC3-203ENST00000406757 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 COG6Q9Y2V7 657 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 PCNTO95613 3336 aa10.6□□□□□ -0.71
GPC3-203ENST00000406757 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 IL6STP40189 918 aaPredicted RBP10.59□□□□□ -0.71
GPC3-203ENST00000406757 EIF5P55010 431 aaKnown RBP10.59□□□□□ -0.71
GPC3-203ENST00000406757 FSTL1Q12841 308 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 HLFQ16534 295 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 FTSJ3Q8IY81 847 aaKnown RBP10.59□□□□□ -0.71
GPC3-203ENST00000406757 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
GPC3-203ENST00000406757 API5Q9BZZ5 524 aaKnown RBP10.59□□□□□ -0.71
GPC3-203ENST00000406757 PTPRCP08575 1304 aa10.58□□□□□ -0.71
GPC3-203ENST00000406757 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 CARMIL3Q8ND23 1372 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 PRELPP51888 382 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
GPC3-203ENST00000406757 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
GPC3-203ENST00000406757 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 ARHGAP45Q92619 1136 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 MYD88Q99836 296 aa10.58□□□□□ -0.72
GPC3-203ENST00000406757 AFDNP55196 1824 aaKnown RBP10.58□□□□□ -0.72
GPC3-203ENST00000406757 H0YIN7 160 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 DDX58O95786 925 aaKnown RBP10.57□□□□□ -0.72
GPC3-203ENST00000406757 NEFLP07196 543 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 LMNB1P20700 586 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 KIF6Q6ZMV9 814 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 TTLL6Q8N841 843 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
GPC3-203ENST00000406757 KLRG1Q96E93 195 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 SBF1O95248 1867 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 ABCC4O15439 1325 aa10.57□□□□□ -0.72
GPC3-203ENST00000406757 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
GPC3-203ENST00000406757 GPTP24298 496 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms